Gene : CGL136 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g000800 Defline:  Conserved in the Green Lineage
Genomic Order:  18 Name:  ? Cre01.g000800
Secondary Identifier:  ? PAC:30788536
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g000800 0.5kb upstream 0.5kb upstream 3035 true chromosome_1: 111401-114435 Chlamydomonas reinhardtii
Cre01.g000800 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 113936-114435 Chlamydomonas reinhardtii
Cre01.g000800 0.5kb downstream 0.5kb downstream 3035 true chromosome_1: 110901-113935 Chlamydomonas reinhardtii
Cre01.g000800 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 110901-111400 Chlamydomonas reinhardtii
Cre01.g000800 1.0kb upstream 1.0kb upstream 3535 true chromosome_1: 111401-114935 Chlamydomonas reinhardtii
Cre01.g000800 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 113936-114935 Chlamydomonas reinhardtii
Cre01.g000800 1.0kb downstream 1.0kb downstream 3535 true chromosome_1: 110401-113935 Chlamydomonas reinhardtii
Cre01.g000800 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 110401-111400 Chlamydomonas reinhardtii
Cre01.g000800 2.0kb upstream 2.0kb upstream 4535 true chromosome_1: 111401-115935 Chlamydomonas reinhardtii
Cre01.g000800 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 113936-115935 Chlamydomonas reinhardtii
Cre01.g000800 2.0kb downstream 2.0kb downstream 4535 true chromosome_1: 109401-113935 Chlamydomonas reinhardtii
Cre01.g000800 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 109401-111400 Chlamydomonas reinhardtii
Cre01.g000800 5.0kb upstream 5.0kb upstream 7535 true chromosome_1: 111401-118935 Chlamydomonas reinhardtii
Cre01.g000800 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 113936-118935 Chlamydomonas reinhardtii
Cre01.g000800 5.0kb downstream 5.0kb downstream 7535 true chromosome_1: 106401-113935 Chlamydomonas reinhardtii
Cre01.g000800 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 106401-111400 Chlamydomonas reinhardtii
Cre01.g000800 10.0kb upstream 10.0kb upstream 12535 true chromosome_1: 111401-123935 Chlamydomonas reinhardtii
Cre01.g000800 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 113936-123935 Chlamydomonas reinhardtii
Cre01.g000800 10.0kb downstream 10.0kb downstream 12535 true chromosome_1: 101401-113935 Chlamydomonas reinhardtii
Cre01.g000800 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 101401-111400 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110908 5260 Chlorophyte View MSA
123425322 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.224       High
cufflinks 1.484        
cufflinks 0.855        
cufflinks 0.945        
cufflinks 1.323        
cufflinks 1.277        
cufflinks 0.854        
cufflinks 1.25        
cufflinks 2.025       High
cufflinks 1.538        
cufflinks 0.522       Low
cufflinks 1.121        
cufflinks 1.482        
cufflinks 1.382        
cufflinks 1.012        
cufflinks 1.877       High
cufflinks 1.577        
cufflinks 1.071        
cufflinks 0.741       Low
cufflinks 0.578       Low
cufflinks 1.003        
cufflinks 1.526        
cufflinks 0.504       Low
cufflinks 1.002        
cufflinks 1.603        
cufflinks 1.00283 0.0 2.47942   Low
cufflinks 2.91584 0.0 6.32279    
cufflinks 2.80858 0.0 6.69191    
cufflinks 3.09987 0.0 6.7113    
cufflinks 3.01571 0.0 6.74427    

0 Strain