Gene : SNR1 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g000250 Defline:  (1 of 2) PTHR12677:SF5 - TVP38/TMEM64 FAMILY MEMBRANE PROTEIN YDJX
Genomic Order:  7 Name:  ? Cre01.g000250
Secondary Identifier:  ? PAC:30788448
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g000250 0.5kb upstream 0.5kb upstream 2946 true chromosome_1: 51590-54535 Chlamydomonas reinhardtii
Cre01.g000250 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 54036-54535 Chlamydomonas reinhardtii
Cre01.g000250 0.5kb downstream 0.5kb downstream 2946 true chromosome_1: 51090-54035 Chlamydomonas reinhardtii
Cre01.g000250 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 51090-51589 Chlamydomonas reinhardtii
Cre01.g000250 1.0kb upstream 1.0kb upstream 3446 true chromosome_1: 51590-55035 Chlamydomonas reinhardtii
Cre01.g000250 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 54036-55035 Chlamydomonas reinhardtii
Cre01.g000250 1.0kb downstream 1.0kb downstream 3446 true chromosome_1: 50590-54035 Chlamydomonas reinhardtii
Cre01.g000250 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 50590-51589 Chlamydomonas reinhardtii
Cre01.g000250 2.0kb upstream 2.0kb upstream 4446 true chromosome_1: 51590-56035 Chlamydomonas reinhardtii
Cre01.g000250 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 54036-56035 Chlamydomonas reinhardtii
Cre01.g000250 2.0kb downstream 2.0kb downstream 4446 true chromosome_1: 49590-54035 Chlamydomonas reinhardtii
Cre01.g000250 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 49590-51589 Chlamydomonas reinhardtii
Cre01.g000250 5.0kb upstream 5.0kb upstream 7446 true chromosome_1: 51590-59035 Chlamydomonas reinhardtii
Cre01.g000250 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 54036-59035 Chlamydomonas reinhardtii
Cre01.g000250 5.0kb downstream 5.0kb downstream 7446 true chromosome_1: 46590-54035 Chlamydomonas reinhardtii
Cre01.g000250 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 46590-51589 Chlamydomonas reinhardtii
Cre01.g000250 10.0kb upstream 10.0kb upstream 12446 true chromosome_1: 51590-64035 Chlamydomonas reinhardtii
Cre01.g000250 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 54036-64035 Chlamydomonas reinhardtii
Cre01.g000250 10.0kb downstream 10.0kb downstream 12446 true chromosome_1: 41590-54035 Chlamydomonas reinhardtii
Cre01.g000250 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 41590-51589 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112473 5260 Chlorophyte View MSA
123428145 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.987     High  
cufflinks 11.627        
cufflinks 7.549        
cufflinks 10.218        
cufflinks 11.893        
cufflinks 10.479        
cufflinks 6.501        
cufflinks 10.445        
cufflinks 14.367     High  
cufflinks 7.32     High  
cufflinks 7.027        
cufflinks 9.406        
cufflinks 10.603     High  
cufflinks 10.831        
cufflinks 8.542        
cufflinks 15.602     High High
cufflinks 13.628     High  
cufflinks 9.951        
cufflinks 1.827       Low
cufflinks 4.654       Low
cufflinks 8.233        
cufflinks 12.593     High  
cufflinks 5.684       Low
cufflinks 11.525        
cufflinks 13.433     High  
cufflinks 10.7675 1.75954 19.7755   Low
cufflinks 17.3879 4.72933 30.0465    
cufflinks 9.54541 0.0 19.4479    
cufflinks 7.56982 1.27729 13.8624   Low
cufflinks 13.7818 2.74369 24.8199    

0 Strain