Gene : SEC8 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g003050 Defline:  (1 of 1) PTHR14146 - EXOCYST COMPLEX COMPONENT 4
Genomic Order:  70 Name:  ? Cre01.g003050
Secondary Identifier:  ? PAC:30788616
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g003050 0.5kb upstream 0.5kb upstream 11135 true chromosome_1: 538051-549185 Chlamydomonas reinhardtii
Cre01.g003050 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 548686-549185 Chlamydomonas reinhardtii
Cre01.g003050 0.5kb downstream 0.5kb downstream 11135 true chromosome_1: 537551-548685 Chlamydomonas reinhardtii
Cre01.g003050 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 537551-538050 Chlamydomonas reinhardtii
Cre01.g003050 1.0kb upstream 1.0kb upstream 11635 true chromosome_1: 538051-549685 Chlamydomonas reinhardtii
Cre01.g003050 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 548686-549685 Chlamydomonas reinhardtii
Cre01.g003050 1.0kb downstream 1.0kb downstream 11635 true chromosome_1: 537051-548685 Chlamydomonas reinhardtii
Cre01.g003050 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 537051-538050 Chlamydomonas reinhardtii
Cre01.g003050 2.0kb upstream 2.0kb upstream 12635 true chromosome_1: 538051-550685 Chlamydomonas reinhardtii
Cre01.g003050 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 548686-550685 Chlamydomonas reinhardtii
Cre01.g003050 2.0kb downstream 2.0kb downstream 12635 true chromosome_1: 536051-548685 Chlamydomonas reinhardtii
Cre01.g003050 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 536051-538050 Chlamydomonas reinhardtii
Cre01.g003050 5.0kb upstream 5.0kb upstream 15635 true chromosome_1: 538051-553685 Chlamydomonas reinhardtii
Cre01.g003050 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 548686-553685 Chlamydomonas reinhardtii
Cre01.g003050 5.0kb downstream 5.0kb downstream 15635 true chromosome_1: 533051-548685 Chlamydomonas reinhardtii
Cre01.g003050 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 533051-538050 Chlamydomonas reinhardtii
Cre01.g003050 10.0kb upstream 10.0kb upstream 20635 true chromosome_1: 538051-558685 Chlamydomonas reinhardtii
Cre01.g003050 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 548686-558685 Chlamydomonas reinhardtii
Cre01.g003050 10.0kb downstream 10.0kb downstream 20635 true chromosome_1: 528051-548685 Chlamydomonas reinhardtii
Cre01.g003050 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 528051-538050 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093477 5260 Chlorophyte View MSA
123410610 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.093       Low
cufflinks 0.283        
cufflinks 0.165     Low  
cufflinks 0.238        
cufflinks 0.207        
cufflinks 0.154     Low  
cufflinks 0.275        
cufflinks 0.226     Low  
cufflinks 0.184        
cufflinks 0.053     Low Low
cufflinks 0.235        
cufflinks 0.302        
cufflinks 0.048     Low Low
cufflinks 0.215        
cufflinks 0.207        
cufflinks 0.25        
cufflinks 0.298        
cufflinks 0.213        
cufflinks 0.032     Low Low
cufflinks 0.434       High
cufflinks 0.18        
cufflinks 0.178        
cufflinks 0.396       High
cufflinks 0.238        
cufflinks 0.238        
cufflinks 2.61286 0.430491 4.79523   High
cufflinks 3.21576 0.62011 5.81142   High
cufflinks 0.286686 0.0 0.828548 Low Low
cufflinks 1.14518 0.0872571 2.20311    
cufflinks 1.67466 0.125428 3.22389   High

0 Strain