Gene : CPLD42 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g004450 Defline:  (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517)
Genomic Order:  105 Name:  ? Cre01.g004450
Secondary Identifier:  ? PAC:30789152
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g004450 0.5kb upstream 0.5kb upstream 3888 true chromosome_1: 853943-857830 Chlamydomonas reinhardtii
Cre01.g004450 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 857331-857830 Chlamydomonas reinhardtii
Cre01.g004450 0.5kb downstream 0.5kb downstream 3888 true chromosome_1: 853443-857330 Chlamydomonas reinhardtii
Cre01.g004450 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 853443-853942 Chlamydomonas reinhardtii
Cre01.g004450 1.0kb upstream 1.0kb upstream 4388 true chromosome_1: 853943-858330 Chlamydomonas reinhardtii
Cre01.g004450 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 857331-858330 Chlamydomonas reinhardtii
Cre01.g004450 1.0kb downstream 1.0kb downstream 4388 true chromosome_1: 852943-857330 Chlamydomonas reinhardtii
Cre01.g004450 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 852943-853942 Chlamydomonas reinhardtii
Cre01.g004450 2.0kb upstream 2.0kb upstream 5388 true chromosome_1: 853943-859330 Chlamydomonas reinhardtii
Cre01.g004450 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 857331-859330 Chlamydomonas reinhardtii
Cre01.g004450 2.0kb downstream 2.0kb downstream 5388 true chromosome_1: 851943-857330 Chlamydomonas reinhardtii
Cre01.g004450 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 851943-853942 Chlamydomonas reinhardtii
Cre01.g004450 5.0kb upstream 5.0kb upstream 8388 true chromosome_1: 853943-862330 Chlamydomonas reinhardtii
Cre01.g004450 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 857331-862330 Chlamydomonas reinhardtii
Cre01.g004450 5.0kb downstream 5.0kb downstream 8388 true chromosome_1: 848943-857330 Chlamydomonas reinhardtii
Cre01.g004450 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 848943-853942 Chlamydomonas reinhardtii
Cre01.g004450 10.0kb upstream 10.0kb upstream 13388 true chromosome_1: 853943-867330 Chlamydomonas reinhardtii
Cre01.g004450 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 857331-867330 Chlamydomonas reinhardtii
Cre01.g004450 10.0kb downstream 10.0kb downstream 13388 true chromosome_1: 843943-857330 Chlamydomonas reinhardtii
Cre01.g004450 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 843943-853942 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113249 5260 Chlorophyte View MSA
123429152 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.565     High  
cufflinks 18.313     High  
cufflinks 16.538     High  
cufflinks 10.524        
cufflinks 20.862     High  
cufflinks 29.259     High  
cufflinks 3.992       Low
cufflinks 10.737        
cufflinks 29.05     High  
cufflinks 21.281     High  
cufflinks 12.335        
cufflinks 20.157     High  
cufflinks 32.643     High  
cufflinks 41.987     High High
cufflinks 10.984        
cufflinks 50.141     High High
cufflinks 25.706     High  
cufflinks 19.985     High  
cufflinks 0.753       Low
cufflinks 11.214        
cufflinks 11.124        
cufflinks 21.474     High  
cufflinks 26.176     High  
cufflinks 16.393     High  
cufflinks 23.675     High  
cufflinks 130.313 0.0 266.997 High Low
cufflinks 64.8735 15.4176 114.329 High  
cufflinks 13.8129 0.0 27.8075    
cufflinks 34.6948 1.67846 67.7111 High Low
cufflinks 92.7662 7.89846 177.634 High  

0 Strain