Gene : FAP289 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g009800 Defline:  coiled-coil Flagellar Associated Protein 289
Genomic Order:  232 Name:  ? Cre01.g009800
Secondary Identifier:  ? PAC:30788413
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g009800 0.5kb upstream 0.5kb upstream 3466 true chromosome_1: 1821959-1825424 Chlamydomonas reinhardtii
Cre01.g009800 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 1824925-1825424 Chlamydomonas reinhardtii
Cre01.g009800 0.5kb downstream 0.5kb downstream 3466 true chromosome_1: 1821459-1824924 Chlamydomonas reinhardtii
Cre01.g009800 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 1821459-1821958 Chlamydomonas reinhardtii
Cre01.g009800 1.0kb upstream 1.0kb upstream 3966 true chromosome_1: 1821959-1825924 Chlamydomonas reinhardtii
Cre01.g009800 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 1824925-1825924 Chlamydomonas reinhardtii
Cre01.g009800 1.0kb downstream 1.0kb downstream 3966 true chromosome_1: 1820959-1824924 Chlamydomonas reinhardtii
Cre01.g009800 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 1820959-1821958 Chlamydomonas reinhardtii
Cre01.g009800 2.0kb upstream 2.0kb upstream 4966 true chromosome_1: 1821959-1826924 Chlamydomonas reinhardtii
Cre01.g009800 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 1824925-1826924 Chlamydomonas reinhardtii
Cre01.g009800 2.0kb downstream 2.0kb downstream 4966 true chromosome_1: 1819959-1824924 Chlamydomonas reinhardtii
Cre01.g009800 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 1819959-1821958 Chlamydomonas reinhardtii
Cre01.g009800 5.0kb upstream 5.0kb upstream 7966 true chromosome_1: 1821959-1829924 Chlamydomonas reinhardtii
Cre01.g009800 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 1824925-1829924 Chlamydomonas reinhardtii
Cre01.g009800 5.0kb downstream 5.0kb downstream 7966 true chromosome_1: 1816959-1824924 Chlamydomonas reinhardtii
Cre01.g009800 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 1816959-1821958 Chlamydomonas reinhardtii
Cre01.g009800 10.0kb upstream 10.0kb upstream 12966 true chromosome_1: 1821959-1834924 Chlamydomonas reinhardtii
Cre01.g009800 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 1824925-1834924 Chlamydomonas reinhardtii
Cre01.g009800 10.0kb downstream 10.0kb downstream 12966 true chromosome_1: 1811959-1824924 Chlamydomonas reinhardtii
Cre01.g009800 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 1811959-1821958 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086403 5260 Chlorophyte View MSA
123403757 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.113        
cufflinks 3.044        
cufflinks 13.079       High
cufflinks 20.386     High High
cufflinks 1.699        
cufflinks 2.196        
cufflinks 2.548        
cufflinks 5.666        
cufflinks 2.872        
cufflinks 0.786       Low
cufflinks 43.008     High High
cufflinks 6.262        
cufflinks 2.294        
cufflinks 1.944        
cufflinks 16.239     High High
cufflinks 0.685       Low
cufflinks 1.899        
cufflinks 6.531        
cufflinks 1.2       Low
cufflinks 2.77        
cufflinks 12.92     High High
cufflinks 2.263        
cufflinks 3.225        
cufflinks 13.268       High
cufflinks 2.311        
cufflinks 1.33434 0.0 2.67903   Low
cufflinks 7.73536 1.84596 13.6248    
cufflinks 8.27944 0.0 16.8936    
cufflinks 4.03641 0.557367 7.51544    
cufflinks 4.96458 0.685541 9.24362   Low

0 Strain