Gene : Cre01.g011350 C. reinhardtii v5.6
Defline:  (1 of 1) K03135 - transcription initiation factor TFIID subunit 11 (TAF11) Genomic Order:  267
Name:  ? Cre01.g011350 Secondary Identifier:  ? PAC:30788728
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g011350 0.5kb upstream 0.5kb upstream 3876 true chromosome_1: 2099516-2103391 Chlamydomonas reinhardtii
Cre01.g011350 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 2099516-2100015 Chlamydomonas reinhardtii
Cre01.g011350 0.5kb downstream 0.5kb downstream 3876 true chromosome_1: 2100016-2103891 Chlamydomonas reinhardtii
Cre01.g011350 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 2103392-2103891 Chlamydomonas reinhardtii
Cre01.g011350 1.0kb upstream 1.0kb upstream 4376 true chromosome_1: 2099016-2103391 Chlamydomonas reinhardtii
Cre01.g011350 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 2099016-2100015 Chlamydomonas reinhardtii
Cre01.g011350 1.0kb downstream 1.0kb downstream 4376 true chromosome_1: 2100016-2104391 Chlamydomonas reinhardtii
Cre01.g011350 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 2103392-2104391 Chlamydomonas reinhardtii
Cre01.g011350 2.0kb upstream 2.0kb upstream 5376 true chromosome_1: 2098016-2103391 Chlamydomonas reinhardtii
Cre01.g011350 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 2098016-2100015 Chlamydomonas reinhardtii
Cre01.g011350 2.0kb downstream 2.0kb downstream 5376 true chromosome_1: 2100016-2105391 Chlamydomonas reinhardtii
Cre01.g011350 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 2103392-2105391 Chlamydomonas reinhardtii
Cre01.g011350 5.0kb upstream 5.0kb upstream 8376 true chromosome_1: 2095016-2103391 Chlamydomonas reinhardtii
Cre01.g011350 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 2095016-2100015 Chlamydomonas reinhardtii
Cre01.g011350 5.0kb downstream 5.0kb downstream 8376 true chromosome_1: 2100016-2108391 Chlamydomonas reinhardtii
Cre01.g011350 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 2103392-2108391 Chlamydomonas reinhardtii
Cre01.g011350 10.0kb upstream 10.0kb upstream 13376 true chromosome_1: 2090016-2103391 Chlamydomonas reinhardtii
Cre01.g011350 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 2090016-2100015 Chlamydomonas reinhardtii
Cre01.g011350 10.0kb downstream 10.0kb downstream 13376 true chromosome_1: 2100016-2113391 Chlamydomonas reinhardtii
Cre01.g011350 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 2103392-2113391 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111857 5260 Chlorophyte View MSA
123426477 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.594       High
cufflinks 2.312        
cufflinks 1.948        
cufflinks 1.493       Low
cufflinks 2.343        
cufflinks 2.337        
cufflinks 2.168        
cufflinks 2.448        
cufflinks 2.265        
cufflinks 1.004       Low
cufflinks 1.418       Low
cufflinks 2.06        
cufflinks 2.309        
cufflinks 1.943        
cufflinks 1.793        
cufflinks 2.763       High
cufflinks 2.136        
cufflinks 1.789        
cufflinks 0.947       Low
cufflinks 2.0        
cufflinks 1.978        
cufflinks 2.665       High
cufflinks 1.479       Low
cufflinks 2.095        
cufflinks 2.404        
cufflinks 5.87417 0.861367 10.887   High
cufflinks 6.84331 1.05104 12.6356   High
cufflinks 4.76566 0.0 10.4398    
cufflinks 4.26365 0.475918 8.05137    
cufflinks 8.00382 1.26222 14.7454   High

0 Strain