Gene : ACH1 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g042750 Defline:  (1 of 1) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase
Genomic Order:  928 Name:  ? Cre01.g042750
Secondary Identifier:  ? PAC:30789585
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii GLYOXYLATE-BYPASS Chlamydomonas reinhardtii pathologic  
Creinhardtii P23-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5464 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-561 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5690 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6549 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g042750 0.5kb upstream 0.5kb upstream 6429 true chromosome_1: 6030556-6036984 Chlamydomonas reinhardtii
Cre01.g042750 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6030556-6031055 Chlamydomonas reinhardtii
Cre01.g042750 0.5kb downstream 0.5kb downstream 6429 true chromosome_1: 6031056-6037484 Chlamydomonas reinhardtii
Cre01.g042750 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6036985-6037484 Chlamydomonas reinhardtii
Cre01.g042750 1.0kb upstream 1.0kb upstream 6929 true chromosome_1: 6030056-6036984 Chlamydomonas reinhardtii
Cre01.g042750 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6030056-6031055 Chlamydomonas reinhardtii
Cre01.g042750 1.0kb downstream 1.0kb downstream 6929 true chromosome_1: 6031056-6037984 Chlamydomonas reinhardtii
Cre01.g042750 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6036985-6037984 Chlamydomonas reinhardtii
Cre01.g042750 2.0kb upstream 2.0kb upstream 7929 true chromosome_1: 6029056-6036984 Chlamydomonas reinhardtii
Cre01.g042750 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6029056-6031055 Chlamydomonas reinhardtii
Cre01.g042750 2.0kb downstream 2.0kb downstream 7929 true chromosome_1: 6031056-6038984 Chlamydomonas reinhardtii
Cre01.g042750 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6036985-6038984 Chlamydomonas reinhardtii
Cre01.g042750 5.0kb upstream 5.0kb upstream 10929 true chromosome_1: 6026056-6036984 Chlamydomonas reinhardtii
Cre01.g042750 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6026056-6031055 Chlamydomonas reinhardtii
Cre01.g042750 5.0kb downstream 5.0kb downstream 10929 true chromosome_1: 6031056-6041984 Chlamydomonas reinhardtii
Cre01.g042750 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6036985-6041984 Chlamydomonas reinhardtii
Cre01.g042750 10.0kb upstream 10.0kb upstream 15929 true chromosome_1: 6021056-6036984 Chlamydomonas reinhardtii
Cre01.g042750 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6021056-6031055 Chlamydomonas reinhardtii
Cre01.g042750 10.0kb downstream 10.0kb downstream 15929 true chromosome_1: 6031056-6046984 Chlamydomonas reinhardtii
Cre01.g042750 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6036985-6046984 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108418 5260 Chlorophyte View MSA
123428745 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.784     High  
cufflinks 344.042     High High
cufflinks 230.972     High  
cufflinks 116.098     High  
cufflinks 309.294     High High
cufflinks 261.297     High High
cufflinks 259.531     High High
cufflinks 79.661     High  
cufflinks 123.557     High  
cufflinks 155.39     High  
cufflinks 164.418     High  
cufflinks 68.078     High  
cufflinks 100.032     High  
cufflinks 315.031     High High
cufflinks 71.452     High  
cufflinks 123.494     High  
cufflinks 30.834     High Low
cufflinks 228.56     High  
cufflinks 8.932     High Low
cufflinks 46.62     High  
cufflinks 70.404     High  
cufflinks 26.638     High Low
cufflinks 84.15     High  
cufflinks 91.256     High  
cufflinks 32.387     High Low
cufflinks 504.048 74.2003 933.896 High  
cufflinks 819.301 41.9363 1596.67 High  
cufflinks 631.414 0.0 1349.39 High  
cufflinks 650.692 123.02 1178.36 High  
cufflinks 841.723 60.955 1622.49 High High

0 Strain