Gene : Cre01.g042502 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR19331//PTHR19331:SF299 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  923
Name:  ? Cre01.g042502 Secondary Identifier:  ? PAC:30789402
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g042502 0.5kb upstream 0.5kb upstream 20736 true chromosome_1: 5983451-6004186 Chlamydomonas reinhardtii
Cre01.g042502 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5983451-5983950 Chlamydomonas reinhardtii
Cre01.g042502 0.5kb downstream 0.5kb downstream 20736 true chromosome_1: 5983951-6004686 Chlamydomonas reinhardtii
Cre01.g042502 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6004187-6004686 Chlamydomonas reinhardtii
Cre01.g042502 1.0kb upstream 1.0kb upstream 21236 true chromosome_1: 5982951-6004186 Chlamydomonas reinhardtii
Cre01.g042502 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5982951-5983950 Chlamydomonas reinhardtii
Cre01.g042502 1.0kb downstream 1.0kb downstream 21236 true chromosome_1: 5983951-6005186 Chlamydomonas reinhardtii
Cre01.g042502 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6004187-6005186 Chlamydomonas reinhardtii
Cre01.g042502 2.0kb upstream 2.0kb upstream 22236 true chromosome_1: 5981951-6004186 Chlamydomonas reinhardtii
Cre01.g042502 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5981951-5983950 Chlamydomonas reinhardtii
Cre01.g042502 2.0kb downstream 2.0kb downstream 22236 true chromosome_1: 5983951-6006186 Chlamydomonas reinhardtii
Cre01.g042502 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6004187-6006186 Chlamydomonas reinhardtii
Cre01.g042502 5.0kb upstream 5.0kb upstream 25236 true chromosome_1: 5978951-6004186 Chlamydomonas reinhardtii
Cre01.g042502 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5978951-5983950 Chlamydomonas reinhardtii
Cre01.g042502 5.0kb downstream 5.0kb downstream 25236 true chromosome_1: 5983951-6009186 Chlamydomonas reinhardtii
Cre01.g042502 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6004187-6009186 Chlamydomonas reinhardtii
Cre01.g042502 10.0kb upstream 10.0kb upstream 30236 true chromosome_1: 5973951-6004186 Chlamydomonas reinhardtii
Cre01.g042502 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5973951-5983950 Chlamydomonas reinhardtii
Cre01.g042502 10.0kb downstream 10.0kb downstream 30236 true chromosome_1: 5983951-6014186 Chlamydomonas reinhardtii
Cre01.g042502 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6004187-6014186 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081418 5260 Chlorophyte View MSA
123399148 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 0.012     Low  
cufflinks 0.048     Low High
cufflinks 0.014     Low  
cufflinks 0.006     Low  
cufflinks 0.027     Low  
cufflinks 0.001     Low Low
cufflinks 0.02     Low  
cufflinks 0.006     Low  
cufflinks 0.001     Low Low
cufflinks 0.058     Low High
cufflinks 0.034     Low High
cufflinks 0.031     Low  
cufflinks 0.013     Low  
cufflinks 0.009     Low  
cufflinks 0.003     Low  
cufflinks 0.014     Low  
cufflinks 0.017     Low  
cufflinks 0.007     Low  
cufflinks 0.002     Low Low
cufflinks 0.008     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.114     Low High
cufflinks 0.006     Low  
cufflinks 0.0359095 0.0 0.0835444 Low Low
cufflinks 0.970405 0.115799 1.82501    
cufflinks 6.63198 0.0 13.4541   High
cufflinks 0.0301032 0.0 0.0714259 Low Low
cufflinks 9.05121 1.04832 17.0541    

0 Strain