Gene : Cre01.g041900 C. reinhardtii v5.6
Defline:  (1 of 1) KOG3102 - Uncharacterized conserved protein Genomic Order:  911
Name:  ? Cre01.g041900 Secondary Identifier:  ? PAC:30788416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g041900 0.5kb upstream 0.5kb upstream 8306 true chromosome_1: 5874975-5883280 Chlamydomonas reinhardtii
Cre01.g041900 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5882781-5883280 Chlamydomonas reinhardtii
Cre01.g041900 0.5kb downstream 0.5kb downstream 8306 true chromosome_1: 5874475-5882780 Chlamydomonas reinhardtii
Cre01.g041900 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5874475-5874974 Chlamydomonas reinhardtii
Cre01.g041900 1.0kb upstream 1.0kb upstream 8806 true chromosome_1: 5874975-5883780 Chlamydomonas reinhardtii
Cre01.g041900 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5882781-5883780 Chlamydomonas reinhardtii
Cre01.g041900 1.0kb downstream 1.0kb downstream 8806 true chromosome_1: 5873975-5882780 Chlamydomonas reinhardtii
Cre01.g041900 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5873975-5874974 Chlamydomonas reinhardtii
Cre01.g041900 2.0kb upstream 2.0kb upstream 9806 true chromosome_1: 5874975-5884780 Chlamydomonas reinhardtii
Cre01.g041900 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5882781-5884780 Chlamydomonas reinhardtii
Cre01.g041900 2.0kb downstream 2.0kb downstream 9806 true chromosome_1: 5872975-5882780 Chlamydomonas reinhardtii
Cre01.g041900 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5872975-5874974 Chlamydomonas reinhardtii
Cre01.g041900 5.0kb upstream 5.0kb upstream 12806 true chromosome_1: 5874975-5887780 Chlamydomonas reinhardtii
Cre01.g041900 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5882781-5887780 Chlamydomonas reinhardtii
Cre01.g041900 5.0kb downstream 5.0kb downstream 12806 true chromosome_1: 5869975-5882780 Chlamydomonas reinhardtii
Cre01.g041900 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5869975-5874974 Chlamydomonas reinhardtii
Cre01.g041900 10.0kb upstream 10.0kb upstream 17806 true chromosome_1: 5874975-5892780 Chlamydomonas reinhardtii
Cre01.g041900 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5882781-5892780 Chlamydomonas reinhardtii
Cre01.g041900 10.0kb downstream 10.0kb downstream 17806 true chromosome_1: 5864975-5882780 Chlamydomonas reinhardtii
Cre01.g041900 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5864975-5874974 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080244 5260 Chlorophyte Singleton cluster - no MSA
123398042 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.191       Low
cufflinks 0.606       High
cufflinks 0.467        
cufflinks 0.41        
cufflinks 0.42        
cufflinks 0.41        
cufflinks 0.835       High
cufflinks 0.671       High
cufflinks 0.311        
cufflinks 0.235        
cufflinks 0.202       Low
cufflinks 0.491        
cufflinks 0.432        
cufflinks 0.408        
cufflinks 0.316        
cufflinks 0.247        
cufflinks 0.352        
cufflinks 0.536        
cufflinks 0.129       Low
cufflinks 0.381        
cufflinks 0.279        
cufflinks 0.227       Low
cufflinks 0.599       High
cufflinks 0.551        
cufflinks 0.234        
cufflinks 1.6463 0.146459 3.14614   High
cufflinks 1.37319 0.0 2.84482    
cufflinks 0.496658 0.0 1.34027    
cufflinks 1.01053 0.0259947 1.99506    
cufflinks 0.688461 0.0 1.4784    

0 Strain