Gene : Cre01.g043700 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13391 - TUBULIN-RELATED PROTEIN Genomic Order:  947
Name:  ? Cre01.g043700 Secondary Identifier:  ? PAC:30788566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g043700 0.5kb upstream 0.5kb upstream 4803 true chromosome_1: 6118173-6122975 Chlamydomonas reinhardtii
Cre01.g043700 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6122476-6122975 Chlamydomonas reinhardtii
Cre01.g043700 0.5kb downstream 0.5kb downstream 4803 true chromosome_1: 6117673-6122475 Chlamydomonas reinhardtii
Cre01.g043700 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6117673-6118172 Chlamydomonas reinhardtii
Cre01.g043700 1.0kb upstream 1.0kb upstream 5303 true chromosome_1: 6118173-6123475 Chlamydomonas reinhardtii
Cre01.g043700 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6122476-6123475 Chlamydomonas reinhardtii
Cre01.g043700 1.0kb downstream 1.0kb downstream 5303 true chromosome_1: 6117173-6122475 Chlamydomonas reinhardtii
Cre01.g043700 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6117173-6118172 Chlamydomonas reinhardtii
Cre01.g043700 2.0kb upstream 2.0kb upstream 6303 true chromosome_1: 6118173-6124475 Chlamydomonas reinhardtii
Cre01.g043700 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6122476-6124475 Chlamydomonas reinhardtii
Cre01.g043700 2.0kb downstream 2.0kb downstream 6303 true chromosome_1: 6116173-6122475 Chlamydomonas reinhardtii
Cre01.g043700 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6116173-6118172 Chlamydomonas reinhardtii
Cre01.g043700 5.0kb upstream 5.0kb upstream 9303 true chromosome_1: 6118173-6127475 Chlamydomonas reinhardtii
Cre01.g043700 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6122476-6127475 Chlamydomonas reinhardtii
Cre01.g043700 5.0kb downstream 5.0kb downstream 9303 true chromosome_1: 6113173-6122475 Chlamydomonas reinhardtii
Cre01.g043700 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6113173-6118172 Chlamydomonas reinhardtii
Cre01.g043700 10.0kb upstream 10.0kb upstream 14303 true chromosome_1: 6118173-6132475 Chlamydomonas reinhardtii
Cre01.g043700 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6122476-6132475 Chlamydomonas reinhardtii
Cre01.g043700 10.0kb downstream 10.0kb downstream 14303 true chromosome_1: 6108173-6122475 Chlamydomonas reinhardtii
Cre01.g043700 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6108173-6118172 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109714 5260 Chlorophyte View MSA
123424627 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.512        
cufflinks 1.098       High
cufflinks 0.594        
cufflinks 0.612        
cufflinks 0.929        
cufflinks 0.747        
cufflinks 0.96       High
cufflinks 0.803        
cufflinks 0.606        
cufflinks 0.118       Low
cufflinks 0.421        
cufflinks 0.778        
cufflinks 0.445        
cufflinks 0.662        
cufflinks 0.666        
cufflinks 0.584        
cufflinks 0.481        
cufflinks 0.67        
cufflinks 0.116       Low
cufflinks 0.427        
cufflinks 0.703        
cufflinks 0.344        
cufflinks 0.379        
cufflinks 0.692        
cufflinks 0.722        
cufflinks 1.04241 0.0 2.13342    
cufflinks 5.64499 0.86699 10.423   High
cufflinks 4.55459 0.0 9.90381   High
cufflinks 1.64713 0.0339628 3.2603   High
cufflinks 2.72773 0.0721513 5.38331    

0 Strain