Gene : Cre01.g043400 C. reinhardtii v5.6
Genomic Order:  941 Name:  ? Cre01.g043400
Secondary Identifier:  ? PAC:30789142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g043400 0.5kb upstream 0.5kb upstream 3796 true chromosome_1: 6087120-6090915 Chlamydomonas reinhardtii
Cre01.g043400 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6090416-6090915 Chlamydomonas reinhardtii
Cre01.g043400 0.5kb downstream 0.5kb downstream 3796 true chromosome_1: 6086620-6090415 Chlamydomonas reinhardtii
Cre01.g043400 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6086620-6087119 Chlamydomonas reinhardtii
Cre01.g043400 1.0kb upstream 1.0kb upstream 4296 true chromosome_1: 6087120-6091415 Chlamydomonas reinhardtii
Cre01.g043400 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6090416-6091415 Chlamydomonas reinhardtii
Cre01.g043400 1.0kb downstream 1.0kb downstream 4296 true chromosome_1: 6086120-6090415 Chlamydomonas reinhardtii
Cre01.g043400 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6086120-6087119 Chlamydomonas reinhardtii
Cre01.g043400 2.0kb upstream 2.0kb upstream 5296 true chromosome_1: 6087120-6092415 Chlamydomonas reinhardtii
Cre01.g043400 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6090416-6092415 Chlamydomonas reinhardtii
Cre01.g043400 2.0kb downstream 2.0kb downstream 5296 true chromosome_1: 6085120-6090415 Chlamydomonas reinhardtii
Cre01.g043400 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6085120-6087119 Chlamydomonas reinhardtii
Cre01.g043400 5.0kb upstream 5.0kb upstream 8296 true chromosome_1: 6087120-6095415 Chlamydomonas reinhardtii
Cre01.g043400 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6090416-6095415 Chlamydomonas reinhardtii
Cre01.g043400 5.0kb downstream 5.0kb downstream 8296 true chromosome_1: 6082120-6090415 Chlamydomonas reinhardtii
Cre01.g043400 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6082120-6087119 Chlamydomonas reinhardtii
Cre01.g043400 10.0kb upstream 10.0kb upstream 13296 true chromosome_1: 6087120-6100415 Chlamydomonas reinhardtii
Cre01.g043400 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6090416-6100415 Chlamydomonas reinhardtii
Cre01.g043400 10.0kb downstream 10.0kb downstream 13296 true chromosome_1: 6077120-6090415 Chlamydomonas reinhardtii
Cre01.g043400 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6077120-6087119 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109782 5260 Chlorophyte View MSA
123426581 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.934        
cufflinks 2.445        
cufflinks 1.044        
cufflinks 1.018        
cufflinks 1.982        
cufflinks 1.996        
cufflinks 3.302       High
cufflinks 2.614        
cufflinks 1.151        
cufflinks 0.572       Low
cufflinks 0.5       Low
cufflinks 2.481        
cufflinks 1.118        
cufflinks 2.283        
cufflinks 1.661        
cufflinks 2.117        
cufflinks 2.021        
cufflinks 1.242        
cufflinks 0.596       Low
cufflinks 3.576       High
cufflinks 1.624        
cufflinks 1.845        
cufflinks 3.295       High
cufflinks 2.187        
cufflinks 1.996        
cufflinks 9.59138 1.19408 17.9887    
cufflinks 4.28497 0.733077 7.83687    
cufflinks 3.38011 0.0 7.19321   Low
cufflinks 3.41356 0.529201 6.29791    
cufflinks 4.90808 0.826306 8.98986   High

0 Strain