Gene : SNR2 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g043050 Defline:  (1 of 2) PTHR12677:SF5 - TVP38/TMEM64 FAMILY MEMBRANE PROTEIN YDJX
Genomic Order:  934 Name:  ? Cre01.g043050
Secondary Identifier:  ? PAC:30789380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g043050 0.5kb upstream 0.5kb upstream 3943 true chromosome_1: 6057593-6061535 Chlamydomonas reinhardtii
Cre01.g043050 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6061036-6061535 Chlamydomonas reinhardtii
Cre01.g043050 0.5kb downstream 0.5kb downstream 3943 true chromosome_1: 6057093-6061035 Chlamydomonas reinhardtii
Cre01.g043050 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6057093-6057592 Chlamydomonas reinhardtii
Cre01.g043050 1.0kb upstream 1.0kb upstream 4443 true chromosome_1: 6057593-6062035 Chlamydomonas reinhardtii
Cre01.g043050 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6061036-6062035 Chlamydomonas reinhardtii
Cre01.g043050 1.0kb downstream 1.0kb downstream 4443 true chromosome_1: 6056593-6061035 Chlamydomonas reinhardtii
Cre01.g043050 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6056593-6057592 Chlamydomonas reinhardtii
Cre01.g043050 2.0kb upstream 2.0kb upstream 5443 true chromosome_1: 6057593-6063035 Chlamydomonas reinhardtii
Cre01.g043050 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6061036-6063035 Chlamydomonas reinhardtii
Cre01.g043050 2.0kb downstream 2.0kb downstream 5443 true chromosome_1: 6055593-6061035 Chlamydomonas reinhardtii
Cre01.g043050 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6055593-6057592 Chlamydomonas reinhardtii
Cre01.g043050 5.0kb upstream 5.0kb upstream 8443 true chromosome_1: 6057593-6066035 Chlamydomonas reinhardtii
Cre01.g043050 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6061036-6066035 Chlamydomonas reinhardtii
Cre01.g043050 5.0kb downstream 5.0kb downstream 8443 true chromosome_1: 6052593-6061035 Chlamydomonas reinhardtii
Cre01.g043050 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6052593-6057592 Chlamydomonas reinhardtii
Cre01.g043050 10.0kb upstream 10.0kb upstream 13443 true chromosome_1: 6057593-6071035 Chlamydomonas reinhardtii
Cre01.g043050 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6061036-6071035 Chlamydomonas reinhardtii
Cre01.g043050 10.0kb downstream 10.0kb downstream 13443 true chromosome_1: 6047593-6061035 Chlamydomonas reinhardtii
Cre01.g043050 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6047593-6057592 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112473 5260 Chlorophyte View MSA
123428145 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.158     High  
cufflinks 9.281        
cufflinks 7.183        
cufflinks 10.78        
cufflinks 8.928        
cufflinks 8.943        
cufflinks 6.691        
cufflinks 11.02        
cufflinks 18.219     High  
cufflinks 4.486       Low
cufflinks 6.159        
cufflinks 13.187        
cufflinks 6.09        
cufflinks 10.49        
cufflinks 8.926        
cufflinks 21.194     High High
cufflinks 31.859     High High
cufflinks 9.395        
cufflinks 2.254       Low
cufflinks 11.544        
cufflinks 10.047        
cufflinks 32.156     High High
cufflinks 6.571        
cufflinks 9.512        
cufflinks 31.087     High High
cufflinks 7.39247 1.15126 13.6337    
cufflinks 9.59957 2.61267 16.5865    
cufflinks 11.1297 0.0 22.3656    
cufflinks 8.52169 1.19632 15.8471    
cufflinks 8.26668 1.64179 14.8916    

0 Strain