Gene : CYN40 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g047700 Defline:  (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)
Genomic Order:  1027 Name:  ? Cre01.g047700
Secondary Identifier:  ? PAC:30788574
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g047700 0.5kb upstream 0.5kb upstream 6043 true chromosome_1: 6650723-6656765 Chlamydomonas reinhardtii
Cre01.g047700 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6656266-6656765 Chlamydomonas reinhardtii
Cre01.g047700 0.5kb downstream 0.5kb downstream 6043 true chromosome_1: 6650223-6656265 Chlamydomonas reinhardtii
Cre01.g047700 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6650223-6650722 Chlamydomonas reinhardtii
Cre01.g047700 1.0kb upstream 1.0kb upstream 6543 true chromosome_1: 6650723-6657265 Chlamydomonas reinhardtii
Cre01.g047700 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6656266-6657265 Chlamydomonas reinhardtii
Cre01.g047700 1.0kb downstream 1.0kb downstream 6543 true chromosome_1: 6649723-6656265 Chlamydomonas reinhardtii
Cre01.g047700 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6649723-6650722 Chlamydomonas reinhardtii
Cre01.g047700 2.0kb upstream 2.0kb upstream 7543 true chromosome_1: 6650723-6658265 Chlamydomonas reinhardtii
Cre01.g047700 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6656266-6658265 Chlamydomonas reinhardtii
Cre01.g047700 2.0kb downstream 2.0kb downstream 7543 true chromosome_1: 6648723-6656265 Chlamydomonas reinhardtii
Cre01.g047700 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6648723-6650722 Chlamydomonas reinhardtii
Cre01.g047700 5.0kb upstream 5.0kb upstream 10543 true chromosome_1: 6650723-6661265 Chlamydomonas reinhardtii
Cre01.g047700 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6656266-6661265 Chlamydomonas reinhardtii
Cre01.g047700 5.0kb downstream 5.0kb downstream 10543 true chromosome_1: 6645723-6656265 Chlamydomonas reinhardtii
Cre01.g047700 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6645723-6650722 Chlamydomonas reinhardtii
Cre01.g047700 10.0kb upstream 10.0kb upstream 15543 true chromosome_1: 6650723-6666265 Chlamydomonas reinhardtii
Cre01.g047700 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6656266-6666265 Chlamydomonas reinhardtii
Cre01.g047700 10.0kb downstream 10.0kb downstream 15543 true chromosome_1: 6640723-6656265 Chlamydomonas reinhardtii
Cre01.g047700 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6640723-6650722 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111658 5260 Chlorophyte View MSA
123428973 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.268        
cufflinks 5.952       High
cufflinks 5.325       High
cufflinks 3.62        
cufflinks 5.015        
cufflinks 4.914        
cufflinks 3.955        
cufflinks 3.704        
cufflinks 3.219        
cufflinks 4.306        
cufflinks 2.521        
cufflinks 3.111        
cufflinks 4.46        
cufflinks 5.884       High
cufflinks 1.951        
cufflinks 3.248        
cufflinks 1.371       Low
cufflinks 4.87        
cufflinks 1.195       Low
cufflinks 2.615        
cufflinks 2.39        
cufflinks 1.043       Low
cufflinks 2.827        
cufflinks 3.556        
cufflinks 1.116       Low
cufflinks 27.2275 1.93201 52.5231   Low
cufflinks 20.3152 5.54758 35.0829    
cufflinks 16.2507 0.0 32.6961    
cufflinks 14.8284 1.93146 27.7253   Low
cufflinks 30.4843 5.12582 55.8428 High High

0 Strain