Gene : PPR7 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g048750 Defline:  (1 of 5) PF13812 - Pentatricopeptide repeat domain (PPR_3)
Genomic Order:  1049 Name:  ? Cre01.g048750
Secondary Identifier:  ? PAC:30789563
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g048750 0.5kb upstream 0.5kb upstream 3050 true chromosome_1: 6771579-6774628 Chlamydomonas reinhardtii
Cre01.g048750 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6774129-6774628 Chlamydomonas reinhardtii
Cre01.g048750 0.5kb downstream 0.5kb downstream 3050 true chromosome_1: 6771079-6774128 Chlamydomonas reinhardtii
Cre01.g048750 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6771079-6771578 Chlamydomonas reinhardtii
Cre01.g048750 1.0kb upstream 1.0kb upstream 3550 true chromosome_1: 6771579-6775128 Chlamydomonas reinhardtii
Cre01.g048750 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6774129-6775128 Chlamydomonas reinhardtii
Cre01.g048750 1.0kb downstream 1.0kb downstream 3550 true chromosome_1: 6770579-6774128 Chlamydomonas reinhardtii
Cre01.g048750 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6770579-6771578 Chlamydomonas reinhardtii
Cre01.g048750 2.0kb upstream 2.0kb upstream 4550 true chromosome_1: 6771579-6776128 Chlamydomonas reinhardtii
Cre01.g048750 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6774129-6776128 Chlamydomonas reinhardtii
Cre01.g048750 2.0kb downstream 2.0kb downstream 4550 true chromosome_1: 6769579-6774128 Chlamydomonas reinhardtii
Cre01.g048750 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6769579-6771578 Chlamydomonas reinhardtii
Cre01.g048750 5.0kb upstream 5.0kb upstream 7550 true chromosome_1: 6771579-6779128 Chlamydomonas reinhardtii
Cre01.g048750 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6774129-6779128 Chlamydomonas reinhardtii
Cre01.g048750 5.0kb downstream 5.0kb downstream 7550 true chromosome_1: 6766579-6774128 Chlamydomonas reinhardtii
Cre01.g048750 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6766579-6771578 Chlamydomonas reinhardtii
Cre01.g048750 10.0kb upstream 10.0kb upstream 12550 true chromosome_1: 6771579-6784128 Chlamydomonas reinhardtii
Cre01.g048750 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6774129-6784128 Chlamydomonas reinhardtii
Cre01.g048750 10.0kb downstream 10.0kb downstream 12550 true chromosome_1: 6761579-6774128 Chlamydomonas reinhardtii
Cre01.g048750 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6761579-6771578 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108866 5260 Chlorophyte View MSA
123429046 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.975     High High
cufflinks 11.084        
cufflinks 6.986        
cufflinks 8.936        
cufflinks 10.063        
cufflinks 11.477        
cufflinks 6.445        
cufflinks 8.401        
cufflinks 12.191     High  
cufflinks 5.524        
cufflinks 11.612        
cufflinks 9.266        
cufflinks 6.681        
cufflinks 10.938        
cufflinks 7.791        
cufflinks 17.635     High High
cufflinks 2.761       Low
cufflinks 7.462        
cufflinks 3.695       Low
cufflinks 6.484        
cufflinks 7.961        
cufflinks 5.2        
cufflinks 9.344        
cufflinks 10.08        
cufflinks 3.13       Low
cufflinks 37.3962 2.17636 72.6161 High High
cufflinks 29.3293 7.94522 50.7134 High  
cufflinks 0.168559 0.0 0.639293 Low Low
cufflinks 11.6648 1.90132 21.4282   Low
cufflinks 15.9007 3.14571 28.6557    

0 Strain