Gene : Cre01.g052000 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13748:SF31 - COBW DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1119
Name:  ? Cre01.g052000 Secondary Identifier:  ? PAC:30788797
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g052000 0.5kb upstream 0.5kb upstream 5262 true chromosome_1: 7225941-7231202 Chlamydomonas reinhardtii
Cre01.g052000 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 7225941-7226440 Chlamydomonas reinhardtii
Cre01.g052000 0.5kb downstream 0.5kb downstream 5262 true chromosome_1: 7226441-7231702 Chlamydomonas reinhardtii
Cre01.g052000 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 7231203-7231702 Chlamydomonas reinhardtii
Cre01.g052000 1.0kb upstream 1.0kb upstream 5762 true chromosome_1: 7225441-7231202 Chlamydomonas reinhardtii
Cre01.g052000 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 7225441-7226440 Chlamydomonas reinhardtii
Cre01.g052000 1.0kb downstream 1.0kb downstream 5762 true chromosome_1: 7226441-7232202 Chlamydomonas reinhardtii
Cre01.g052000 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 7231203-7232202 Chlamydomonas reinhardtii
Cre01.g052000 2.0kb upstream 2.0kb upstream 6762 true chromosome_1: 7224441-7231202 Chlamydomonas reinhardtii
Cre01.g052000 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 7224441-7226440 Chlamydomonas reinhardtii
Cre01.g052000 2.0kb downstream 2.0kb downstream 6762 true chromosome_1: 7226441-7233202 Chlamydomonas reinhardtii
Cre01.g052000 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 7231203-7233202 Chlamydomonas reinhardtii
Cre01.g052000 5.0kb upstream 5.0kb upstream 9762 true chromosome_1: 7221441-7231202 Chlamydomonas reinhardtii
Cre01.g052000 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 7221441-7226440 Chlamydomonas reinhardtii
Cre01.g052000 5.0kb downstream 5.0kb downstream 9762 true chromosome_1: 7226441-7236202 Chlamydomonas reinhardtii
Cre01.g052000 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 7231203-7236202 Chlamydomonas reinhardtii
Cre01.g052000 10.0kb upstream 10.0kb upstream 14762 true chromosome_1: 7216441-7231202 Chlamydomonas reinhardtii
Cre01.g052000 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 7216441-7226440 Chlamydomonas reinhardtii
Cre01.g052000 10.0kb downstream 10.0kb downstream 14762 true chromosome_1: 7226441-7241202 Chlamydomonas reinhardtii
Cre01.g052000 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 7231203-7241202 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111602 5260 Chlorophyte View MSA
123428327 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.757       Low
cufflinks 7.083        
cufflinks 10.186        
cufflinks 9.126        
cufflinks 6.322        
cufflinks 8.683        
cufflinks 9.168        
cufflinks 9.131        
cufflinks 4.521       Low
cufflinks 6.816     High  
cufflinks 7.739        
cufflinks 10.9        
cufflinks 7.681        
cufflinks 11.659        
cufflinks 5.907        
cufflinks 8.171        
cufflinks 9.105        
cufflinks 8.727        
cufflinks 4.14       Low
cufflinks 26.404     High High
cufflinks 7.272        
cufflinks 6.652        
cufflinks 19.304     High High
cufflinks 8.711        
cufflinks 7.13        
cufflinks 33.1593 0.0866837 66.2319 High High
cufflinks 9.19977 2.48907 15.9105    
cufflinks 10.8071 0.0 21.7179    
cufflinks 16.8871 1.20261 32.5716    
cufflinks 13.8001 2.60868 24.9915    

0 Strain