Gene : Cre01.g053288 C. reinhardtii v5.6
Defline:  (1 of 1) K01974 - RNA 3'-terminal phosphate cyclase (ATP) (RTCA, rtcA) Genomic Order:  1143
Name:  ? Cre01.g053288 Secondary Identifier:  ? PAC:30788336
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g053288 0.5kb upstream 0.5kb upstream 5136 true chromosome_1: 7418242-7423377 Chlamydomonas reinhardtii
Cre01.g053288 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 7422878-7423377 Chlamydomonas reinhardtii
Cre01.g053288 0.5kb downstream 0.5kb downstream 5136 true chromosome_1: 7417742-7422877 Chlamydomonas reinhardtii
Cre01.g053288 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 7417742-7418241 Chlamydomonas reinhardtii
Cre01.g053288 1.0kb upstream 1.0kb upstream 5636 true chromosome_1: 7418242-7423877 Chlamydomonas reinhardtii
Cre01.g053288 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 7422878-7423877 Chlamydomonas reinhardtii
Cre01.g053288 1.0kb downstream 1.0kb downstream 5636 true chromosome_1: 7417242-7422877 Chlamydomonas reinhardtii
Cre01.g053288 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 7417242-7418241 Chlamydomonas reinhardtii
Cre01.g053288 2.0kb upstream 2.0kb upstream 6636 true chromosome_1: 7418242-7424877 Chlamydomonas reinhardtii
Cre01.g053288 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 7422878-7424877 Chlamydomonas reinhardtii
Cre01.g053288 2.0kb downstream 2.0kb downstream 6636 true chromosome_1: 7416242-7422877 Chlamydomonas reinhardtii
Cre01.g053288 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 7416242-7418241 Chlamydomonas reinhardtii
Cre01.g053288 5.0kb upstream 5.0kb upstream 9636 true chromosome_1: 7418242-7427877 Chlamydomonas reinhardtii
Cre01.g053288 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 7422878-7427877 Chlamydomonas reinhardtii
Cre01.g053288 5.0kb downstream 5.0kb downstream 9636 true chromosome_1: 7413242-7422877 Chlamydomonas reinhardtii
Cre01.g053288 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 7413242-7418241 Chlamydomonas reinhardtii
Cre01.g053288 10.0kb upstream 10.0kb upstream 14636 true chromosome_1: 7418242-7432877 Chlamydomonas reinhardtii
Cre01.g053288 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 7422878-7432877 Chlamydomonas reinhardtii
Cre01.g053288 10.0kb downstream 10.0kb downstream 14636 true chromosome_1: 7408242-7422877 Chlamydomonas reinhardtii
Cre01.g053288 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 7408242-7418241 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113214 5260 Chlorophyte View MSA
123427148 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.272        
cufflinks 0.225        
cufflinks 0.583       High
cufflinks 0.303        
cufflinks 1.028       High
cufflinks 0.267        
cufflinks 0.299        
cufflinks 0.325        
cufflinks 0.212        
cufflinks 0.091       Low
cufflinks 0.285        
cufflinks 0.433        
cufflinks 0.613       High
cufflinks 0.433        
cufflinks 0.281        
cufflinks 0.209        
cufflinks 0.333        
cufflinks 0.736       High
cufflinks 0.098       Low
cufflinks 0.441        
cufflinks 0.287        
cufflinks 0.224        
cufflinks 0.223        
cufflinks 0.302        
cufflinks 0.239        
cufflinks 58.331 0.0 126.185 High Low
cufflinks 13.8301 3.71758 23.9426    
cufflinks 1.1358 0.0 4.22183   Low
cufflinks 1.77095 0.0195948 3.52231   Low
cufflinks 3.38872 0.247502 6.52993   Low

0 Strain