Gene : Cre01.g053250 C. reinhardtii v5.6
Defline:  (1 of 2) KOG1513 - Nuclear helicase MOP-3/SNO (DEAD-box superfamily) Genomic Order:  1142
Name:  ? Cre01.g053250 Secondary Identifier:  ? PAC:30789240
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g053250 0.5kb upstream 0.5kb upstream 17447 true chromosome_1: 7401241-7418687 Chlamydomonas reinhardtii
Cre01.g053250 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 7418188-7418687 Chlamydomonas reinhardtii
Cre01.g053250 0.5kb downstream 0.5kb downstream 17447 true chromosome_1: 7400741-7418187 Chlamydomonas reinhardtii
Cre01.g053250 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 7400741-7401240 Chlamydomonas reinhardtii
Cre01.g053250 1.0kb upstream 1.0kb upstream 17947 true chromosome_1: 7401241-7419187 Chlamydomonas reinhardtii
Cre01.g053250 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 7418188-7419187 Chlamydomonas reinhardtii
Cre01.g053250 1.0kb downstream 1.0kb downstream 17947 true chromosome_1: 7400241-7418187 Chlamydomonas reinhardtii
Cre01.g053250 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 7400241-7401240 Chlamydomonas reinhardtii
Cre01.g053250 2.0kb upstream 2.0kb upstream 18947 true chromosome_1: 7401241-7420187 Chlamydomonas reinhardtii
Cre01.g053250 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 7418188-7420187 Chlamydomonas reinhardtii
Cre01.g053250 2.0kb downstream 2.0kb downstream 18947 true chromosome_1: 7399241-7418187 Chlamydomonas reinhardtii
Cre01.g053250 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 7399241-7401240 Chlamydomonas reinhardtii
Cre01.g053250 5.0kb upstream 5.0kb upstream 21947 true chromosome_1: 7401241-7423187 Chlamydomonas reinhardtii
Cre01.g053250 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 7418188-7423187 Chlamydomonas reinhardtii
Cre01.g053250 5.0kb downstream 5.0kb downstream 21947 true chromosome_1: 7396241-7418187 Chlamydomonas reinhardtii
Cre01.g053250 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 7396241-7401240 Chlamydomonas reinhardtii
Cre01.g053250 10.0kb upstream 10.0kb upstream 26947 true chromosome_1: 7401241-7428187 Chlamydomonas reinhardtii
Cre01.g053250 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 7418188-7428187 Chlamydomonas reinhardtii
Cre01.g053250 10.0kb downstream 10.0kb downstream 26947 true chromosome_1: 7391241-7418187 Chlamydomonas reinhardtii
Cre01.g053250 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 7391241-7401240 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112150 5260 Chlorophyte View MSA
123424908 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.304       Low
cufflinks 0.26       Low
cufflinks 1.502        
cufflinks 1.552        
cufflinks 1.927        
cufflinks 0.821        
cufflinks 1.089        
cufflinks 2.101       High
cufflinks 2.214       High
cufflinks 0.372       Low
cufflinks 1.822        
cufflinks 1.884        
cufflinks 0.851        
cufflinks 0.97        
cufflinks 1.638        
cufflinks 0.349       Low
cufflinks 0.976        
cufflinks 1.331        
cufflinks 0.55       Low
cufflinks 2.053        
cufflinks 1.275        
cufflinks 0.962        
cufflinks 2.37       High
cufflinks 1.869        
cufflinks 1.051        
cufflinks 3.7349 0.449868 7.01993   High
cufflinks 5.15646 1.40761 8.90531    
cufflinks 6.38827 0.0 12.8542    
cufflinks 5.87909 0.473458 11.2847   High
cufflinks 5.18177 0.986965 9.37658   Low

0 Strain