Gene : COQD2 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g029000 Defline:  (1 of 2) PTHR10108//PTHR10108:SF813 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED
Genomic Order:  635 Name:  ? Cre01.g029000
Secondary Identifier:  ? PAC:30788727
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g029000 0.5kb upstream 0.5kb upstream 3079 true chromosome_1: 4300853-4303931 Chlamydomonas reinhardtii
Cre01.g029000 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 4300853-4301352 Chlamydomonas reinhardtii
Cre01.g029000 0.5kb downstream 0.5kb downstream 3079 true chromosome_1: 4301353-4304431 Chlamydomonas reinhardtii
Cre01.g029000 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 4303932-4304431 Chlamydomonas reinhardtii
Cre01.g029000 1.0kb upstream 1.0kb upstream 3579 true chromosome_1: 4300353-4303931 Chlamydomonas reinhardtii
Cre01.g029000 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 4300353-4301352 Chlamydomonas reinhardtii
Cre01.g029000 1.0kb downstream 1.0kb downstream 3579 true chromosome_1: 4301353-4304931 Chlamydomonas reinhardtii
Cre01.g029000 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 4303932-4304931 Chlamydomonas reinhardtii
Cre01.g029000 2.0kb upstream 2.0kb upstream 4579 true chromosome_1: 4299353-4303931 Chlamydomonas reinhardtii
Cre01.g029000 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 4299353-4301352 Chlamydomonas reinhardtii
Cre01.g029000 2.0kb downstream 2.0kb downstream 4579 true chromosome_1: 4301353-4305931 Chlamydomonas reinhardtii
Cre01.g029000 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 4303932-4305931 Chlamydomonas reinhardtii
Cre01.g029000 5.0kb upstream 5.0kb upstream 7579 true chromosome_1: 4296353-4303931 Chlamydomonas reinhardtii
Cre01.g029000 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 4296353-4301352 Chlamydomonas reinhardtii
Cre01.g029000 5.0kb downstream 5.0kb downstream 7579 true chromosome_1: 4301353-4308931 Chlamydomonas reinhardtii
Cre01.g029000 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 4303932-4308931 Chlamydomonas reinhardtii
Cre01.g029000 10.0kb upstream 10.0kb upstream 12579 true chromosome_1: 4291353-4303931 Chlamydomonas reinhardtii
Cre01.g029000 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 4291353-4301352 Chlamydomonas reinhardtii
Cre01.g029000 10.0kb downstream 10.0kb downstream 12579 true chromosome_1: 4301353-4313931 Chlamydomonas reinhardtii
Cre01.g029000 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 4303932-4313931 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112904 5260 Chlorophyte View MSA
123428356 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.506        
cufflinks 0.611       Low
cufflinks 1.026        
cufflinks 3.487       High
cufflinks 2.941        
cufflinks 1.868        
cufflinks 1.893        
cufflinks 1.615        
cufflinks 3.047        
cufflinks 0.371       Low
cufflinks 0.785       Low
cufflinks 2.326        
cufflinks 2.424        
cufflinks 6.332       High
cufflinks 2.02        
cufflinks 2.231        
cufflinks 0.354       Low
cufflinks 1.144        
cufflinks 4.26       High
cufflinks 1.486        
cufflinks 2.419        
cufflinks 1.272        
cufflinks 1.254        
cufflinks 2.532        
cufflinks 1.418        
cufflinks 14.5866 2.16138 27.0119   Low
cufflinks 9.65823 2.16684 17.1496    
cufflinks 1.24781 0.0 3.25918   Low
cufflinks 1.08654 0.0 2.2607   Low
cufflinks 6.35983 0.860503 11.8592    

0 Strain