Gene : Cre01.g030450 C. reinhardtii v5.6
Defline:  (1 of 4) KOG1872 - Ubiquitin-specific protease Genomic Order:  664
Name:  ? Cre01.g030450 Secondary Identifier:  ? PAC:30788364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g030450 0.5kb upstream 0.5kb upstream 9992 true chromosome_1: 4466213-4476204 Chlamydomonas reinhardtii
Cre01.g030450 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 4466213-4466712 Chlamydomonas reinhardtii
Cre01.g030450 0.5kb downstream 0.5kb downstream 9992 true chromosome_1: 4466713-4476704 Chlamydomonas reinhardtii
Cre01.g030450 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 4476205-4476704 Chlamydomonas reinhardtii
Cre01.g030450 1.0kb upstream 1.0kb upstream 10492 true chromosome_1: 4465713-4476204 Chlamydomonas reinhardtii
Cre01.g030450 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 4465713-4466712 Chlamydomonas reinhardtii
Cre01.g030450 1.0kb downstream 1.0kb downstream 10492 true chromosome_1: 4466713-4477204 Chlamydomonas reinhardtii
Cre01.g030450 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 4476205-4477204 Chlamydomonas reinhardtii
Cre01.g030450 2.0kb upstream 2.0kb upstream 11492 true chromosome_1: 4464713-4476204 Chlamydomonas reinhardtii
Cre01.g030450 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 4464713-4466712 Chlamydomonas reinhardtii
Cre01.g030450 2.0kb downstream 2.0kb downstream 11492 true chromosome_1: 4466713-4478204 Chlamydomonas reinhardtii
Cre01.g030450 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 4476205-4478204 Chlamydomonas reinhardtii
Cre01.g030450 5.0kb upstream 5.0kb upstream 14492 true chromosome_1: 4461713-4476204 Chlamydomonas reinhardtii
Cre01.g030450 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 4461713-4466712 Chlamydomonas reinhardtii
Cre01.g030450 5.0kb downstream 5.0kb downstream 14492 true chromosome_1: 4466713-4481204 Chlamydomonas reinhardtii
Cre01.g030450 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 4476205-4481204 Chlamydomonas reinhardtii
Cre01.g030450 10.0kb upstream 10.0kb upstream 19492 true chromosome_1: 4456713-4476204 Chlamydomonas reinhardtii
Cre01.g030450 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 4456713-4466712 Chlamydomonas reinhardtii
Cre01.g030450 10.0kb downstream 10.0kb downstream 19492 true chromosome_1: 4466713-4486204 Chlamydomonas reinhardtii
Cre01.g030450 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 4476205-4486204 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094039 5260 Chlorophyte View MSA
123427406 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.36       Low
cufflinks 1.409        
cufflinks 1.382        
cufflinks 1.493        
cufflinks 1.1        
cufflinks 0.958        
cufflinks 1.688       High
cufflinks 1.886       High
cufflinks 0.609        
cufflinks 0.3       Low
cufflinks 1.59        
cufflinks 1.304        
cufflinks 0.594        
cufflinks 1.017        
cufflinks 1.12        
cufflinks 0.732        
cufflinks 0.86        
cufflinks 1.275        
cufflinks 0.322       Low
cufflinks 1.511        
cufflinks 1.057        
cufflinks 0.765        
cufflinks 1.324        
cufflinks 1.969       High
cufflinks 0.894        
cufflinks 1.65567 0.264066 3.04727   Low
cufflinks 3.58707 0.900222 6.27391    
cufflinks 2.75318 0.0 5.63977    
cufflinks 3.28907 0.504956 6.07318    
cufflinks 5.14375 1.01979 9.26771    

0 Strain