Gene : Cre01.g033050 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR21290 - SPHINGOMYELIN SYNTHETASE Genomic Order:  720
Name:  ? Cre01.g033050 Secondary Identifier:  ? PAC:30788648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g033050 0.5kb upstream 0.5kb upstream 4266 true chromosome_1: 4779330-4783595 Chlamydomonas reinhardtii
Cre01.g033050 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 4779330-4779829 Chlamydomonas reinhardtii
Cre01.g033050 0.5kb downstream 0.5kb downstream 4266 true chromosome_1: 4779830-4784095 Chlamydomonas reinhardtii
Cre01.g033050 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 4783596-4784095 Chlamydomonas reinhardtii
Cre01.g033050 1.0kb upstream 1.0kb upstream 4766 true chromosome_1: 4778830-4783595 Chlamydomonas reinhardtii
Cre01.g033050 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 4778830-4779829 Chlamydomonas reinhardtii
Cre01.g033050 1.0kb downstream 1.0kb downstream 4766 true chromosome_1: 4779830-4784595 Chlamydomonas reinhardtii
Cre01.g033050 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 4783596-4784595 Chlamydomonas reinhardtii
Cre01.g033050 2.0kb upstream 2.0kb upstream 5766 true chromosome_1: 4777830-4783595 Chlamydomonas reinhardtii
Cre01.g033050 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 4777830-4779829 Chlamydomonas reinhardtii
Cre01.g033050 2.0kb downstream 2.0kb downstream 5766 true chromosome_1: 4779830-4785595 Chlamydomonas reinhardtii
Cre01.g033050 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 4783596-4785595 Chlamydomonas reinhardtii
Cre01.g033050 5.0kb upstream 5.0kb upstream 8766 true chromosome_1: 4774830-4783595 Chlamydomonas reinhardtii
Cre01.g033050 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 4774830-4779829 Chlamydomonas reinhardtii
Cre01.g033050 5.0kb downstream 5.0kb downstream 8766 true chromosome_1: 4779830-4788595 Chlamydomonas reinhardtii
Cre01.g033050 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 4783596-4788595 Chlamydomonas reinhardtii
Cre01.g033050 10.0kb upstream 10.0kb upstream 13766 true chromosome_1: 4769830-4783595 Chlamydomonas reinhardtii
Cre01.g033050 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 4769830-4779829 Chlamydomonas reinhardtii
Cre01.g033050 10.0kb downstream 10.0kb downstream 13766 true chromosome_1: 4779830-4793595 Chlamydomonas reinhardtii
Cre01.g033050 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 4783596-4793595 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098659 5260 Chlorophyte View MSA
123427335 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.722       Low
cufflinks 1.413        
cufflinks 1.127        
cufflinks 0.979        
cufflinks 1.3        
cufflinks 1.409        
cufflinks 1.245        
cufflinks 1.428        
cufflinks 0.981        
cufflinks 0.554       Low
cufflinks 1.207        
cufflinks 1.388        
cufflinks 1.436        
cufflinks 1.321        
cufflinks 1.097        
cufflinks 1.461        
cufflinks 1.326        
cufflinks 1.069        
cufflinks 0.437       Low
cufflinks 1.641       High
cufflinks 1.054        
cufflinks 1.208        
cufflinks 1.363        
cufflinks 1.461        
cufflinks 1.272        
cufflinks 1.56742 0.0 3.13509   Low
cufflinks 4.49841 0.373256 8.62356    
cufflinks 2.9356 0.0 6.6629   High
cufflinks 2.17153 0.11125 4.23181    
cufflinks 4.99683 0.620455 9.37321   High

0 Strain