Gene : Cre01.g032250 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Genomic Order:  704
Name:  ? Cre01.g032250 Secondary Identifier:  ? PAC:30788667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g032250 0.5kb upstream 0.5kb upstream 4392 true chromosome_1: 4683620-4688011 Chlamydomonas reinhardtii
Cre01.g032250 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 4683620-4684119 Chlamydomonas reinhardtii
Cre01.g032250 0.5kb downstream 0.5kb downstream 4392 true chromosome_1: 4684120-4688511 Chlamydomonas reinhardtii
Cre01.g032250 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 4688012-4688511 Chlamydomonas reinhardtii
Cre01.g032250 1.0kb upstream 1.0kb upstream 4892 true chromosome_1: 4683120-4688011 Chlamydomonas reinhardtii
Cre01.g032250 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 4683120-4684119 Chlamydomonas reinhardtii
Cre01.g032250 1.0kb downstream 1.0kb downstream 4892 true chromosome_1: 4684120-4689011 Chlamydomonas reinhardtii
Cre01.g032250 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 4688012-4689011 Chlamydomonas reinhardtii
Cre01.g032250 2.0kb upstream 2.0kb upstream 5892 true chromosome_1: 4682120-4688011 Chlamydomonas reinhardtii
Cre01.g032250 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 4682120-4684119 Chlamydomonas reinhardtii
Cre01.g032250 2.0kb downstream 2.0kb downstream 5892 true chromosome_1: 4684120-4690011 Chlamydomonas reinhardtii
Cre01.g032250 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 4688012-4690011 Chlamydomonas reinhardtii
Cre01.g032250 5.0kb upstream 5.0kb upstream 8892 true chromosome_1: 4679120-4688011 Chlamydomonas reinhardtii
Cre01.g032250 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 4679120-4684119 Chlamydomonas reinhardtii
Cre01.g032250 5.0kb downstream 5.0kb downstream 8892 true chromosome_1: 4684120-4693011 Chlamydomonas reinhardtii
Cre01.g032250 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 4688012-4693011 Chlamydomonas reinhardtii
Cre01.g032250 10.0kb upstream 10.0kb upstream 13892 true chromosome_1: 4674120-4688011 Chlamydomonas reinhardtii
Cre01.g032250 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 4674120-4684119 Chlamydomonas reinhardtii
Cre01.g032250 10.0kb downstream 10.0kb downstream 13892 true chromosome_1: 4684120-4698011 Chlamydomonas reinhardtii
Cre01.g032250 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 4688012-4698011 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085956 5260 Chlorophyte View MSA
123426799 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.588       Low
cufflinks 4.99        
cufflinks 6.69       High
cufflinks 5.545        
cufflinks 4.296        
cufflinks 4.225        
cufflinks 5.041        
cufflinks 5.77        
cufflinks 2.683       Low
cufflinks 2.09       Low
cufflinks 6.851       High
cufflinks 5.388        
cufflinks 3.318        
cufflinks 4.465        
cufflinks 3.929        
cufflinks 3.795        
cufflinks 3.468        
cufflinks 4.712        
cufflinks 1.375       Low
cufflinks 6.616       High
cufflinks 3.942        
cufflinks 3.355        
cufflinks 5.106        
cufflinks 5.541        
cufflinks 2.75       Low
cufflinks 7.85841 1.14342 14.5734   Low
cufflinks 5.02687 1.01385 9.0399   Low
cufflinks 4.08776 0.0 8.52848    
cufflinks 5.44487 0.915747 9.97399   Low
cufflinks 7.4847 1.49363 13.4758    

0 Strain