Gene : ERV14 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g036550 Defline:  (1 of 1) PTHR12290//PTHR12290:SF11 - CORNICHON-RELATED // PROTEIN CORNICHON
Genomic Order:  794 Name:  ? Cre01.g036550
Secondary Identifier:  ? PAC:30788541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g036550 0.5kb upstream 0.5kb upstream 3103 true chromosome_1: 5240503-5243605 Chlamydomonas reinhardtii
Cre01.g036550 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5240503-5241002 Chlamydomonas reinhardtii
Cre01.g036550 0.5kb downstream 0.5kb downstream 3103 true chromosome_1: 5241003-5244105 Chlamydomonas reinhardtii
Cre01.g036550 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5243606-5244105 Chlamydomonas reinhardtii
Cre01.g036550 1.0kb upstream 1.0kb upstream 3603 true chromosome_1: 5240003-5243605 Chlamydomonas reinhardtii
Cre01.g036550 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5240003-5241002 Chlamydomonas reinhardtii
Cre01.g036550 1.0kb downstream 1.0kb downstream 3603 true chromosome_1: 5241003-5244605 Chlamydomonas reinhardtii
Cre01.g036550 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5243606-5244605 Chlamydomonas reinhardtii
Cre01.g036550 2.0kb upstream 2.0kb upstream 4603 true chromosome_1: 5239003-5243605 Chlamydomonas reinhardtii
Cre01.g036550 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5239003-5241002 Chlamydomonas reinhardtii
Cre01.g036550 2.0kb downstream 2.0kb downstream 4603 true chromosome_1: 5241003-5245605 Chlamydomonas reinhardtii
Cre01.g036550 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5243606-5245605 Chlamydomonas reinhardtii
Cre01.g036550 5.0kb upstream 5.0kb upstream 7603 true chromosome_1: 5236003-5243605 Chlamydomonas reinhardtii
Cre01.g036550 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5236003-5241002 Chlamydomonas reinhardtii
Cre01.g036550 5.0kb downstream 5.0kb downstream 7603 true chromosome_1: 5241003-5248605 Chlamydomonas reinhardtii
Cre01.g036550 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5243606-5248605 Chlamydomonas reinhardtii
Cre01.g036550 10.0kb upstream 10.0kb upstream 12603 true chromosome_1: 5231003-5243605 Chlamydomonas reinhardtii
Cre01.g036550 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5231003-5241002 Chlamydomonas reinhardtii
Cre01.g036550 10.0kb downstream 10.0kb downstream 12603 true chromosome_1: 5241003-5253605 Chlamydomonas reinhardtii
Cre01.g036550 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5243606-5253605 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110649 5260 Chlorophyte View MSA
123427918 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.532        
cufflinks 10.331        
cufflinks 16.366     High High
cufflinks 13.117       High
cufflinks 10.205        
cufflinks 9.625        
cufflinks 14.323     High High
cufflinks 11.18        
cufflinks 9.623        
cufflinks 7.158     High  
cufflinks 13.877       High
cufflinks 9.753        
cufflinks 10.836     High  
cufflinks 10.134        
cufflinks 10.867        
cufflinks 7.464        
cufflinks 4.68       Low
cufflinks 10.771        
cufflinks 9.229     High  
cufflinks 10.141        
cufflinks 9.605        
cufflinks 5.162       Low
cufflinks 9.375        
cufflinks 11.37        
cufflinks 4.851       Low
cufflinks 12.7737 2.12585 23.4215    
cufflinks 12.8986 3.11561 22.6816    
cufflinks 10.9663 0.0 22.4426    
cufflinks 8.70182 1.44404 15.9596   Low
cufflinks 14.3913 2.88591 25.8967    

0 Strain