Gene : MSC2 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g035600 Defline:  (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL
Genomic Order:  775 Name:  ? Cre01.g035600
Secondary Identifier:  ? PAC:30789700
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g035600 0.5kb upstream 0.5kb upstream 6176 true chromosome_1: 5117150-5123325 Chlamydomonas reinhardtii
Cre01.g035600 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5122826-5123325 Chlamydomonas reinhardtii
Cre01.g035600 0.5kb downstream 0.5kb downstream 6176 true chromosome_1: 5116650-5122825 Chlamydomonas reinhardtii
Cre01.g035600 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5116650-5117149 Chlamydomonas reinhardtii
Cre01.g035600 1.0kb upstream 1.0kb upstream 6676 true chromosome_1: 5117150-5123825 Chlamydomonas reinhardtii
Cre01.g035600 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5122826-5123825 Chlamydomonas reinhardtii
Cre01.g035600 1.0kb downstream 1.0kb downstream 6676 true chromosome_1: 5116150-5122825 Chlamydomonas reinhardtii
Cre01.g035600 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5116150-5117149 Chlamydomonas reinhardtii
Cre01.g035600 2.0kb upstream 2.0kb upstream 7676 true chromosome_1: 5117150-5124825 Chlamydomonas reinhardtii
Cre01.g035600 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5122826-5124825 Chlamydomonas reinhardtii
Cre01.g035600 2.0kb downstream 2.0kb downstream 7676 true chromosome_1: 5115150-5122825 Chlamydomonas reinhardtii
Cre01.g035600 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5115150-5117149 Chlamydomonas reinhardtii
Cre01.g035600 5.0kb upstream 5.0kb upstream 10676 true chromosome_1: 5117150-5127825 Chlamydomonas reinhardtii
Cre01.g035600 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5122826-5127825 Chlamydomonas reinhardtii
Cre01.g035600 5.0kb downstream 5.0kb downstream 10676 true chromosome_1: 5112150-5122825 Chlamydomonas reinhardtii
Cre01.g035600 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5112150-5117149 Chlamydomonas reinhardtii
Cre01.g035600 10.0kb upstream 10.0kb upstream 15676 true chromosome_1: 5117150-5132825 Chlamydomonas reinhardtii
Cre01.g035600 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5122826-5132825 Chlamydomonas reinhardtii
Cre01.g035600 10.0kb downstream 10.0kb downstream 15676 true chromosome_1: 5107150-5122825 Chlamydomonas reinhardtii
Cre01.g035600 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5107150-5117149 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098460 5260 Chlorophyte View MSA
123427972 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.002     Low Low
cufflinks 4.52884E-4 0.0 0.00793845 Low  
cufflinks 0.00190923 0.0 0.0437246 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.85779E-5 0.0 0.00384104 Low Low
cufflinks 5.21358E-5 0.0 0.00284213 Low Low

0 Strain