Gene : SELF C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g038950 Defline:  (1 of 1) PTHR13077:SF6 - 15 KDA SELENOPROTEIN
Genomic Order:  844 Name:  ? Cre01.g038950
Secondary Identifier:  ? PAC:30789410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g038950 0.5kb upstream 0.5kb upstream 2424 true chromosome_1: 5512406-5514829 Chlamydomonas reinhardtii
Cre01.g038950 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5512406-5512905 Chlamydomonas reinhardtii
Cre01.g038950 0.5kb downstream 0.5kb downstream 2424 true chromosome_1: 5512906-5515329 Chlamydomonas reinhardtii
Cre01.g038950 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5514830-5515329 Chlamydomonas reinhardtii
Cre01.g038950 1.0kb upstream 1.0kb upstream 2924 true chromosome_1: 5511906-5514829 Chlamydomonas reinhardtii
Cre01.g038950 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5511906-5512905 Chlamydomonas reinhardtii
Cre01.g038950 1.0kb downstream 1.0kb downstream 2924 true chromosome_1: 5512906-5515829 Chlamydomonas reinhardtii
Cre01.g038950 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5514830-5515829 Chlamydomonas reinhardtii
Cre01.g038950 2.0kb upstream 2.0kb upstream 3924 true chromosome_1: 5510906-5514829 Chlamydomonas reinhardtii
Cre01.g038950 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5510906-5512905 Chlamydomonas reinhardtii
Cre01.g038950 2.0kb downstream 2.0kb downstream 3924 true chromosome_1: 5512906-5516829 Chlamydomonas reinhardtii
Cre01.g038950 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5514830-5516829 Chlamydomonas reinhardtii
Cre01.g038950 5.0kb upstream 5.0kb upstream 6924 true chromosome_1: 5507906-5514829 Chlamydomonas reinhardtii
Cre01.g038950 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5507906-5512905 Chlamydomonas reinhardtii
Cre01.g038950 5.0kb downstream 5.0kb downstream 6924 true chromosome_1: 5512906-5519829 Chlamydomonas reinhardtii
Cre01.g038950 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5514830-5519829 Chlamydomonas reinhardtii
Cre01.g038950 10.0kb upstream 10.0kb upstream 11924 true chromosome_1: 5502906-5514829 Chlamydomonas reinhardtii
Cre01.g038950 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5502906-5512905 Chlamydomonas reinhardtii
Cre01.g038950 10.0kb downstream 10.0kb downstream 11924 true chromosome_1: 5512906-5524829 Chlamydomonas reinhardtii
Cre01.g038950 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5514830-5524829 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111911 5260 Chlorophyte View MSA
123424520 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.023     High High
cufflinks 11.646        
cufflinks 14.846     High High
cufflinks 10.025        
cufflinks 12.909     High  
cufflinks 12.008        
cufflinks 12.263        
cufflinks 12.45        
cufflinks 10.302        
cufflinks 5.385       Low
cufflinks 8.707        
cufflinks 9.334        
cufflinks 15.54     High High
cufflinks 9.738        
cufflinks 9.31        
cufflinks 12.05     High  
cufflinks 10.084        
cufflinks 9.82        
cufflinks 7.393     High Low
cufflinks 10.537        
cufflinks 9.39        
cufflinks 10.187        
cufflinks 7.831       Low
cufflinks 12.893        
cufflinks 10.189        
cufflinks 13.8933 2.36066 25.4259   High
cufflinks 38.0106 10.3271 65.6941 High High
cufflinks 27.6542 0.0 55.606 High  
cufflinks 8.51832 1.2162 15.8204   Low
cufflinks 20.023 3.85129 36.1947    

0 Strain