Gene : SQD2 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g038550 Defline:  (1 of 2) K06119 - sulfoquinovosyltransferase (SQD2)
Genomic Order:  836 Name:  ? Cre01.g038550
Secondary Identifier:  ? PAC:30789073
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g038550 0.5kb upstream 0.5kb upstream 8550 true chromosome_1: 5471106-5479655 Chlamydomonas reinhardtii
Cre01.g038550 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5471106-5471605 Chlamydomonas reinhardtii
Cre01.g038550 0.5kb downstream 0.5kb downstream 8550 true chromosome_1: 5471606-5480155 Chlamydomonas reinhardtii
Cre01.g038550 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5479656-5480155 Chlamydomonas reinhardtii
Cre01.g038550 1.0kb upstream 1.0kb upstream 9050 true chromosome_1: 5470606-5479655 Chlamydomonas reinhardtii
Cre01.g038550 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5470606-5471605 Chlamydomonas reinhardtii
Cre01.g038550 1.0kb downstream 1.0kb downstream 9050 true chromosome_1: 5471606-5480655 Chlamydomonas reinhardtii
Cre01.g038550 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5479656-5480655 Chlamydomonas reinhardtii
Cre01.g038550 2.0kb upstream 2.0kb upstream 10050 true chromosome_1: 5469606-5479655 Chlamydomonas reinhardtii
Cre01.g038550 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5469606-5471605 Chlamydomonas reinhardtii
Cre01.g038550 2.0kb downstream 2.0kb downstream 10050 true chromosome_1: 5471606-5481655 Chlamydomonas reinhardtii
Cre01.g038550 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5479656-5481655 Chlamydomonas reinhardtii
Cre01.g038550 5.0kb upstream 5.0kb upstream 13050 true chromosome_1: 5466606-5479655 Chlamydomonas reinhardtii
Cre01.g038550 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5466606-5471605 Chlamydomonas reinhardtii
Cre01.g038550 5.0kb downstream 5.0kb downstream 13050 true chromosome_1: 5471606-5484655 Chlamydomonas reinhardtii
Cre01.g038550 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5479656-5484655 Chlamydomonas reinhardtii
Cre01.g038550 10.0kb upstream 10.0kb upstream 18050 true chromosome_1: 5461606-5479655 Chlamydomonas reinhardtii
Cre01.g038550 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5461606-5471605 Chlamydomonas reinhardtii
Cre01.g038550 10.0kb downstream 10.0kb downstream 18050 true chromosome_1: 5471606-5489655 Chlamydomonas reinhardtii
Cre01.g038550 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5479656-5489655 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113199 5260 Chlorophyte View MSA
123429006 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.694        
cufflinks 6.11        
cufflinks 3.834        
cufflinks 3.922        
cufflinks 6.099        
cufflinks 5.49        
cufflinks 3.781        
cufflinks 5.123        
cufflinks 5.093        
cufflinks 2.679        
cufflinks 2.499        
cufflinks 4.898        
cufflinks 3.714        
cufflinks 5.175        
cufflinks 3.701        
cufflinks 6.011        
cufflinks 4.228        
cufflinks 4.24        
cufflinks 0.565       Low
cufflinks 0.707       Low
cufflinks 3.998        
cufflinks 4.311        
cufflinks 1.861       Low
cufflinks 4.056        
cufflinks 4.688        
cufflinks 15.547 0.934293 30.1597   High
cufflinks 12.793 3.45858 22.1273    
cufflinks 7.31612 0.0 14.7175    
cufflinks 4.17522 0.706432 7.64401   Low
cufflinks 10.1409 1.90638 18.3753   High

0 Strain