Gene : COP7 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g038050 Defline:  (1 of 1) PF00072//PF00512//PF01036 - Response regulator receiver domain (Response_reg) // His Kinase A (phospho-acceptor) domain (HisKA) // Bacteriorhodopsin-like protein (Bac_rhodopsin)
Genomic Order:  825 Name:  ? Cre01.g038050
Secondary Identifier:  ? PAC:30788425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g038050 0.5kb upstream 0.5kb upstream 13772 true chromosome_1: 5408176-5421947 Chlamydomonas reinhardtii
Cre01.g038050 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5408176-5408675 Chlamydomonas reinhardtii
Cre01.g038050 0.5kb downstream 0.5kb downstream 13772 true chromosome_1: 5408676-5422447 Chlamydomonas reinhardtii
Cre01.g038050 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5421948-5422447 Chlamydomonas reinhardtii
Cre01.g038050 1.0kb upstream 1.0kb upstream 14272 true chromosome_1: 5407676-5421947 Chlamydomonas reinhardtii
Cre01.g038050 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5407676-5408675 Chlamydomonas reinhardtii
Cre01.g038050 1.0kb downstream 1.0kb downstream 14272 true chromosome_1: 5408676-5422947 Chlamydomonas reinhardtii
Cre01.g038050 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5421948-5422947 Chlamydomonas reinhardtii
Cre01.g038050 2.0kb upstream 2.0kb upstream 15272 true chromosome_1: 5406676-5421947 Chlamydomonas reinhardtii
Cre01.g038050 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5406676-5408675 Chlamydomonas reinhardtii
Cre01.g038050 2.0kb downstream 2.0kb downstream 15272 true chromosome_1: 5408676-5423947 Chlamydomonas reinhardtii
Cre01.g038050 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5421948-5423947 Chlamydomonas reinhardtii
Cre01.g038050 5.0kb upstream 5.0kb upstream 18272 true chromosome_1: 5403676-5421947 Chlamydomonas reinhardtii
Cre01.g038050 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5403676-5408675 Chlamydomonas reinhardtii
Cre01.g038050 5.0kb downstream 5.0kb downstream 18272 true chromosome_1: 5408676-5426947 Chlamydomonas reinhardtii
Cre01.g038050 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5421948-5426947 Chlamydomonas reinhardtii
Cre01.g038050 10.0kb upstream 10.0kb upstream 23272 true chromosome_1: 5398676-5421947 Chlamydomonas reinhardtii
Cre01.g038050 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5398676-5408675 Chlamydomonas reinhardtii
Cre01.g038050 10.0kb downstream 10.0kb downstream 23272 true chromosome_1: 5408676-5431947 Chlamydomonas reinhardtii
Cre01.g038050 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5421948-5431947 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124082715 5260 Chlorophyte View MSA
123400357 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46        
cufflinks 1.646        
cufflinks 2.59        
cufflinks 4.559       High
cufflinks 1.44        
cufflinks 1.831        
cufflinks 2.105        
cufflinks 3.176        
cufflinks 1.472        
cufflinks 0.755       Low
cufflinks 3.818       High
cufflinks 3.188        
cufflinks 0.679       Low
cufflinks 1.822        
cufflinks 2.437        
cufflinks 2.078        
cufflinks 3.057        
cufflinks 2.402        
cufflinks 0.751       Low
cufflinks 2.469        
cufflinks 3.147        
cufflinks 2.479        
cufflinks 1.374        
cufflinks 2.487        
cufflinks 3.315        
cufflinks 1.24613 0.195756 2.2965   High
cufflinks 4.68771 1.2802 8.09521    
cufflinks 6.05398 0.0 12.1844   High
cufflinks 4.10734 0.4419 7.77278   High
cufflinks 4.14154 0.81985 7.46323   Low

0 Strain