Gene : CYN19-1 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g037400 Defline:  (1 of 1) K12868 - pre-mRNA-splicing factor SYF2 (SYF2)
Genomic Order:  811 Name:  ? Cre01.g037400
Secondary Identifier:  ? PAC:30789223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g037400 0.5kb upstream 0.5kb upstream 6852 true chromosome_1: 5329143-5335994 Chlamydomonas reinhardtii
Cre01.g037400 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5329143-5329642 Chlamydomonas reinhardtii
Cre01.g037400 0.5kb downstream 0.5kb downstream 6852 true chromosome_1: 5329643-5336494 Chlamydomonas reinhardtii
Cre01.g037400 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5335995-5336494 Chlamydomonas reinhardtii
Cre01.g037400 1.0kb upstream 1.0kb upstream 7352 true chromosome_1: 5328643-5335994 Chlamydomonas reinhardtii
Cre01.g037400 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5328643-5329642 Chlamydomonas reinhardtii
Cre01.g037400 1.0kb downstream 1.0kb downstream 7352 true chromosome_1: 5329643-5336994 Chlamydomonas reinhardtii
Cre01.g037400 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5335995-5336994 Chlamydomonas reinhardtii
Cre01.g037400 2.0kb upstream 2.0kb upstream 8352 true chromosome_1: 5327643-5335994 Chlamydomonas reinhardtii
Cre01.g037400 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5327643-5329642 Chlamydomonas reinhardtii
Cre01.g037400 2.0kb downstream 2.0kb downstream 8352 true chromosome_1: 5329643-5337994 Chlamydomonas reinhardtii
Cre01.g037400 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5335995-5337994 Chlamydomonas reinhardtii
Cre01.g037400 5.0kb upstream 5.0kb upstream 11352 true chromosome_1: 5324643-5335994 Chlamydomonas reinhardtii
Cre01.g037400 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5324643-5329642 Chlamydomonas reinhardtii
Cre01.g037400 5.0kb downstream 5.0kb downstream 11352 true chromosome_1: 5329643-5340994 Chlamydomonas reinhardtii
Cre01.g037400 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5335995-5340994 Chlamydomonas reinhardtii
Cre01.g037400 10.0kb upstream 10.0kb upstream 16352 true chromosome_1: 5319643-5335994 Chlamydomonas reinhardtii
Cre01.g037400 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5319643-5329642 Chlamydomonas reinhardtii
Cre01.g037400 10.0kb downstream 10.0kb downstream 16352 true chromosome_1: 5329643-5345994 Chlamydomonas reinhardtii
Cre01.g037400 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5335995-5345994 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111658 5260 Chlorophyte View MSA
123428973 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.546       Low
cufflinks 3.403       High
cufflinks 2.408        
cufflinks 2.494        
cufflinks 2.823        
cufflinks 2.597        
cufflinks 3.429       High
cufflinks 3.687       High
cufflinks 1.9        
cufflinks 1.121       Low
cufflinks 1.7        
cufflinks 3.017        
cufflinks 1.788        
cufflinks 2.551        
cufflinks 2.353        
cufflinks 2.298        
cufflinks 2.222        
cufflinks 2.296        
cufflinks 1.054       Low
cufflinks 3.022        
cufflinks 2.665        
cufflinks 2.281        
cufflinks 2.51        
cufflinks 3.051        
cufflinks 2.337        
cufflinks 6.45313 1.02094 11.8853   High
cufflinks 7.29013 1.81454 12.7657    
cufflinks 3.66305 0.0 7.71973   Low
cufflinks 5.01252 0.84941 9.17564    
cufflinks 6.67489 1.30437 12.0454    

0 Strain