Gene : Cre01.g040950 C. reinhardtii v5.6
Defline:  (1 of 2) PF02816//PF13519 - Alpha-kinase family (Alpha_kinase) // von Willebrand factor type A domain (VWA_2) Genomic Order:  889
Name:  ? Cre01.g040950 Secondary Identifier:  ? PAC:30789447
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g040950 0.5kb upstream 0.5kb upstream 4172 true chromosome_1: 5736288-5740459 Chlamydomonas reinhardtii
Cre01.g040950 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5736288-5736787 Chlamydomonas reinhardtii
Cre01.g040950 0.5kb downstream 0.5kb downstream 4172 true chromosome_1: 5736788-5740959 Chlamydomonas reinhardtii
Cre01.g040950 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5740460-5740959 Chlamydomonas reinhardtii
Cre01.g040950 1.0kb upstream 1.0kb upstream 4672 true chromosome_1: 5735788-5740459 Chlamydomonas reinhardtii
Cre01.g040950 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5735788-5736787 Chlamydomonas reinhardtii
Cre01.g040950 1.0kb downstream 1.0kb downstream 4672 true chromosome_1: 5736788-5741459 Chlamydomonas reinhardtii
Cre01.g040950 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5740460-5741459 Chlamydomonas reinhardtii
Cre01.g040950 2.0kb upstream 2.0kb upstream 5672 true chromosome_1: 5734788-5740459 Chlamydomonas reinhardtii
Cre01.g040950 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5734788-5736787 Chlamydomonas reinhardtii
Cre01.g040950 2.0kb downstream 2.0kb downstream 5672 true chromosome_1: 5736788-5742459 Chlamydomonas reinhardtii
Cre01.g040950 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5740460-5742459 Chlamydomonas reinhardtii
Cre01.g040950 5.0kb upstream 5.0kb upstream 8672 true chromosome_1: 5731788-5740459 Chlamydomonas reinhardtii
Cre01.g040950 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5731788-5736787 Chlamydomonas reinhardtii
Cre01.g040950 5.0kb downstream 5.0kb downstream 8672 true chromosome_1: 5736788-5745459 Chlamydomonas reinhardtii
Cre01.g040950 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5740460-5745459 Chlamydomonas reinhardtii
Cre01.g040950 10.0kb upstream 10.0kb upstream 13672 true chromosome_1: 5726788-5740459 Chlamydomonas reinhardtii
Cre01.g040950 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5726788-5736787 Chlamydomonas reinhardtii
Cre01.g040950 10.0kb downstream 10.0kb downstream 13672 true chromosome_1: 5736788-5750459 Chlamydomonas reinhardtii
Cre01.g040950 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5740460-5750459 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109425 5260 Chlorophyte View MSA
123422935 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low  
cufflinks 0.377       High
cufflinks 0.02     Low  
cufflinks 0.012     Low  
cufflinks 0.272       High
cufflinks 0.005     Low Low
cufflinks 0.329       High
cufflinks 0.01     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.01     Low  
cufflinks 0.173       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.09        
cufflinks 0.013     Low  
cufflinks 0.053     Low  
cufflinks 0.051     Low  
cufflinks 0.032     Low  
cufflinks 0.01     Low  
cufflinks 0.025     Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.261022 0.0 0.761371 Low  
cufflinks 1.85697 0.0 4.41165   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.40812 0.0 2.90307   High

0 Strain