Gene : TPK1 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g040050 Defline:  (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80)
Genomic Order:  867 Name:  ? Cre01.g040050
Secondary Identifier:  ? PAC:30789112
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6908 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g040050 0.5kb upstream 0.5kb upstream 4656 true chromosome_1: 5630078-5634733 Chlamydomonas reinhardtii
Cre01.g040050 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5634234-5634733 Chlamydomonas reinhardtii
Cre01.g040050 0.5kb downstream 0.5kb downstream 4656 true chromosome_1: 5629578-5634233 Chlamydomonas reinhardtii
Cre01.g040050 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5629578-5630077 Chlamydomonas reinhardtii
Cre01.g040050 1.0kb upstream 1.0kb upstream 5156 true chromosome_1: 5630078-5635233 Chlamydomonas reinhardtii
Cre01.g040050 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5634234-5635233 Chlamydomonas reinhardtii
Cre01.g040050 1.0kb downstream 1.0kb downstream 5156 true chromosome_1: 5629078-5634233 Chlamydomonas reinhardtii
Cre01.g040050 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5629078-5630077 Chlamydomonas reinhardtii
Cre01.g040050 2.0kb upstream 2.0kb upstream 6156 true chromosome_1: 5630078-5636233 Chlamydomonas reinhardtii
Cre01.g040050 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5634234-5636233 Chlamydomonas reinhardtii
Cre01.g040050 2.0kb downstream 2.0kb downstream 6156 true chromosome_1: 5628078-5634233 Chlamydomonas reinhardtii
Cre01.g040050 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5628078-5630077 Chlamydomonas reinhardtii
Cre01.g040050 5.0kb upstream 5.0kb upstream 9156 true chromosome_1: 5630078-5639233 Chlamydomonas reinhardtii
Cre01.g040050 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5634234-5639233 Chlamydomonas reinhardtii
Cre01.g040050 5.0kb downstream 5.0kb downstream 9156 true chromosome_1: 5625078-5634233 Chlamydomonas reinhardtii
Cre01.g040050 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5625078-5630077 Chlamydomonas reinhardtii
Cre01.g040050 10.0kb upstream 10.0kb upstream 14156 true chromosome_1: 5630078-5644233 Chlamydomonas reinhardtii
Cre01.g040050 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5634234-5644233 Chlamydomonas reinhardtii
Cre01.g040050 10.0kb downstream 10.0kb downstream 14156 true chromosome_1: 5620078-5634233 Chlamydomonas reinhardtii
Cre01.g040050 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5620078-5630077 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112865 5260 Chlorophyte View MSA
123424730 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.554        
cufflinks 0.714        
cufflinks 0.531        
cufflinks 0.701        
cufflinks 0.791        
cufflinks 0.664        
cufflinks 0.473        
cufflinks 0.826        
cufflinks 0.399        
cufflinks 0.209       Low
cufflinks 0.597        
cufflinks 0.953        
cufflinks 0.5        
cufflinks 0.722        
cufflinks 0.815        
cufflinks 0.697        
cufflinks 0.691        
cufflinks 0.633        
cufflinks 0.141       Low
cufflinks 0.633        
cufflinks 0.656        
cufflinks 0.837        
cufflinks 1.114       High
cufflinks 0.796        
cufflinks 0.926        
cufflinks 9.92842 1.46055 18.3963   Low
cufflinks 6.15063 1.11728 11.184    
cufflinks 4.72408 0.0 10.0533    
cufflinks 2.13361 0.152275 4.11494   Low
cufflinks 2.85984 0.255671 5.46402   Low

0 Strain