Gene : MRPS16 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g429550 Defline:  (1 of 1) PTHR12919:SF20 - 28S RIBOSOMAL PROTEIN S16, MITOCHONDRIAL
Genomic Order:  271 Name:  ? Cre10.g429550
Secondary Identifier:  ? PAC:30790703
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g429550 0.5kb upstream 0.5kb upstream 2372 true chromosome_10: 1607872-1610243 Chlamydomonas reinhardtii
Cre10.g429550 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 1607872-1608371 Chlamydomonas reinhardtii
Cre10.g429550 0.5kb downstream 0.5kb downstream 2372 true chromosome_10: 1608372-1610743 Chlamydomonas reinhardtii
Cre10.g429550 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 1610244-1610743 Chlamydomonas reinhardtii
Cre10.g429550 1.0kb upstream 1.0kb upstream 2872 true chromosome_10: 1607372-1610243 Chlamydomonas reinhardtii
Cre10.g429550 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 1607372-1608371 Chlamydomonas reinhardtii
Cre10.g429550 1.0kb downstream 1.0kb downstream 2872 true chromosome_10: 1608372-1611243 Chlamydomonas reinhardtii
Cre10.g429550 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 1610244-1611243 Chlamydomonas reinhardtii
Cre10.g429550 2.0kb upstream 2.0kb upstream 3872 true chromosome_10: 1606372-1610243 Chlamydomonas reinhardtii
Cre10.g429550 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 1606372-1608371 Chlamydomonas reinhardtii
Cre10.g429550 2.0kb downstream 2.0kb downstream 3872 true chromosome_10: 1608372-1612243 Chlamydomonas reinhardtii
Cre10.g429550 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 1610244-1612243 Chlamydomonas reinhardtii
Cre10.g429550 5.0kb upstream 5.0kb upstream 6872 true chromosome_10: 1603372-1610243 Chlamydomonas reinhardtii
Cre10.g429550 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 1603372-1608371 Chlamydomonas reinhardtii
Cre10.g429550 5.0kb downstream 5.0kb downstream 6872 true chromosome_10: 1608372-1615243 Chlamydomonas reinhardtii
Cre10.g429550 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 1610244-1615243 Chlamydomonas reinhardtii
Cre10.g429550 10.0kb upstream 10.0kb upstream 11872 true chromosome_10: 1598372-1610243 Chlamydomonas reinhardtii
Cre10.g429550 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 1598372-1608371 Chlamydomonas reinhardtii
Cre10.g429550 10.0kb downstream 10.0kb downstream 11872 true chromosome_10: 1608372-1620243 Chlamydomonas reinhardtii
Cre10.g429550 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 1610244-1620243 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112797 5260 Chlorophyte View MSA
123426601 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.711        
cufflinks 11.367        
cufflinks 11.754        
cufflinks 12.803        
cufflinks 11.45        
cufflinks 12.433        
cufflinks 10.157        
cufflinks 13.329        
cufflinks 11.356     High  
cufflinks 4.778       Low
cufflinks 9.837        
cufflinks 13.415        
cufflinks 9.239        
cufflinks 12.688        
cufflinks 9.073        
cufflinks 14.066     High  
cufflinks 11.89     High  
cufflinks 11.183        
cufflinks 3.043       Low
cufflinks 12.469        
cufflinks 9.431        
cufflinks 9.614        
cufflinks 8.178        
cufflinks 13.779        
cufflinks 9.912        
cufflinks 18.001 2.11869 33.8833   High
cufflinks 12.892 3.45179 22.3322   High
cufflinks 10.7808 0.0 21.8456    
cufflinks 9.08462 1.52394 16.6453    
cufflinks 18.4059 3.6319 33.1799   High

0 Strain