Gene : Cre10.g433900 C. reinhardtii v5.6
Defline:  (1 of 2) K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Genomic Order:  362
Name:  ? Cre10.g433900 Secondary Identifier:  ? PAC:30790729
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7511 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g433900 0.5kb upstream 0.5kb upstream 12422 true chromosome_10: 2204033-2216454 Chlamydomonas reinhardtii
Cre10.g433900 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2204033-2204532 Chlamydomonas reinhardtii
Cre10.g433900 0.5kb downstream 0.5kb downstream 12422 true chromosome_10: 2204533-2216954 Chlamydomonas reinhardtii
Cre10.g433900 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2216455-2216954 Chlamydomonas reinhardtii
Cre10.g433900 1.0kb upstream 1.0kb upstream 12922 true chromosome_10: 2203533-2216454 Chlamydomonas reinhardtii
Cre10.g433900 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2203533-2204532 Chlamydomonas reinhardtii
Cre10.g433900 1.0kb downstream 1.0kb downstream 12922 true chromosome_10: 2204533-2217454 Chlamydomonas reinhardtii
Cre10.g433900 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2216455-2217454 Chlamydomonas reinhardtii
Cre10.g433900 2.0kb upstream 2.0kb upstream 13922 true chromosome_10: 2202533-2216454 Chlamydomonas reinhardtii
Cre10.g433900 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2202533-2204532 Chlamydomonas reinhardtii
Cre10.g433900 2.0kb downstream 2.0kb downstream 13922 true chromosome_10: 2204533-2218454 Chlamydomonas reinhardtii
Cre10.g433900 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2216455-2218454 Chlamydomonas reinhardtii
Cre10.g433900 5.0kb upstream 5.0kb upstream 16922 true chromosome_10: 2199533-2216454 Chlamydomonas reinhardtii
Cre10.g433900 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2199533-2204532 Chlamydomonas reinhardtii
Cre10.g433900 5.0kb downstream 5.0kb downstream 16922 true chromosome_10: 2204533-2221454 Chlamydomonas reinhardtii
Cre10.g433900 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2216455-2221454 Chlamydomonas reinhardtii
Cre10.g433900 10.0kb upstream 10.0kb upstream 21922 true chromosome_10: 2194533-2216454 Chlamydomonas reinhardtii
Cre10.g433900 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2194533-2204532 Chlamydomonas reinhardtii
Cre10.g433900 10.0kb downstream 10.0kb downstream 21922 true chromosome_10: 2204533-2226454 Chlamydomonas reinhardtii
Cre10.g433900 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2216455-2226454 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093454 5260 Chlorophyte View MSA
123410594 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.416       Low
cufflinks 1.075        
cufflinks 1.334        
cufflinks 1.802        
cufflinks 0.884        
cufflinks 0.777        
cufflinks 1.188        
cufflinks 1.82        
cufflinks 0.67        
cufflinks 0.304       Low
cufflinks 2.603       High
cufflinks 1.964        
cufflinks 0.452       Low
cufflinks 0.884        
cufflinks 1.472        
cufflinks 0.581       Low
cufflinks 1.524        
cufflinks 1.191        
cufflinks 0.398       Low
cufflinks 2.161       High
cufflinks 1.479        
cufflinks 1.324        
cufflinks 2.146       High
cufflinks 1.872        
cufflinks 1.482        
cufflinks 5.55975 0.0 11.9768   High
cufflinks 8.67943 0.666387 16.6925    
cufflinks 8.77769 0.0 19.5326    
cufflinks 7.24504 0.0 16.1557   High
cufflinks 6.28521 0.0 12.5791   Low

0 Strain