Gene : SMP10 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g432700 Defline:  (1 of 1) KOG3293 - Small nuclear ribonucleoprotein (snRNP)
Genomic Order:  335 Name:  ? Cre10.g432700
Secondary Identifier:  ? PAC:30790094
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g432700 0.5kb upstream 0.5kb upstream 3406 true chromosome_10: 2023060-2026465 Chlamydomonas reinhardtii
Cre10.g432700 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2025966-2026465 Chlamydomonas reinhardtii
Cre10.g432700 0.5kb downstream 0.5kb downstream 3406 true chromosome_10: 2022560-2025965 Chlamydomonas reinhardtii
Cre10.g432700 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2022560-2023059 Chlamydomonas reinhardtii
Cre10.g432700 1.0kb upstream 1.0kb upstream 3906 true chromosome_10: 2023060-2026965 Chlamydomonas reinhardtii
Cre10.g432700 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2025966-2026965 Chlamydomonas reinhardtii
Cre10.g432700 1.0kb downstream 1.0kb downstream 3906 true chromosome_10: 2022060-2025965 Chlamydomonas reinhardtii
Cre10.g432700 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2022060-2023059 Chlamydomonas reinhardtii
Cre10.g432700 2.0kb upstream 2.0kb upstream 4906 true chromosome_10: 2023060-2027965 Chlamydomonas reinhardtii
Cre10.g432700 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2025966-2027965 Chlamydomonas reinhardtii
Cre10.g432700 2.0kb downstream 2.0kb downstream 4906 true chromosome_10: 2021060-2025965 Chlamydomonas reinhardtii
Cre10.g432700 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2021060-2023059 Chlamydomonas reinhardtii
Cre10.g432700 5.0kb upstream 5.0kb upstream 7906 true chromosome_10: 2023060-2030965 Chlamydomonas reinhardtii
Cre10.g432700 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2025966-2030965 Chlamydomonas reinhardtii
Cre10.g432700 5.0kb downstream 5.0kb downstream 7906 true chromosome_10: 2018060-2025965 Chlamydomonas reinhardtii
Cre10.g432700 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2018060-2023059 Chlamydomonas reinhardtii
Cre10.g432700 10.0kb upstream 10.0kb upstream 12906 true chromosome_10: 2023060-2035965 Chlamydomonas reinhardtii
Cre10.g432700 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2025966-2035965 Chlamydomonas reinhardtii
Cre10.g432700 10.0kb downstream 10.0kb downstream 12906 true chromosome_10: 2013060-2025965 Chlamydomonas reinhardtii
Cre10.g432700 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2013060-2023059 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086417 5260 Chlorophyte View MSA
123403769 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.621        
cufflinks 1.38        
cufflinks 0.302       Low
cufflinks 1.406        
cufflinks 2.172       High
cufflinks 1.531        
cufflinks 1.304        
cufflinks 2.197       High
cufflinks 1.843        
cufflinks 0.658       Low
cufflinks 0.66       Low
cufflinks 1.871        
cufflinks 2.161       High
cufflinks 1.615        
cufflinks 1.316        
cufflinks 0.664       Low
cufflinks 0.808        
cufflinks 1.765        
cufflinks 1.13        
cufflinks 2.191       High
cufflinks 1.103        
cufflinks 0.885        
cufflinks 1.582        
cufflinks 1.804        
cufflinks 0.762       Low
cufflinks 1.8293 0.0314723 3.62713   Low
cufflinks 3.73807 0.420901 7.05523    
cufflinks 1.65062 0.0 3.94064    
cufflinks 1.67902 0.0165111 3.34153   Low
cufflinks 3.0422 0.281106 5.80329    

0 Strain