Gene : CCT1 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g439100 Defline:  (1 of 1) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1)
Genomic Order:  467 Name:  ? Cre10.g439100
Secondary Identifier:  ? PAC:30790162
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g439100 0.5kb upstream 0.5kb upstream 5238 true chromosome_10: 2793319-2798556 Chlamydomonas reinhardtii
Cre10.g439100 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2793319-2793818 Chlamydomonas reinhardtii
Cre10.g439100 0.5kb downstream 0.5kb downstream 5238 true chromosome_10: 2793819-2799056 Chlamydomonas reinhardtii
Cre10.g439100 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2798557-2799056 Chlamydomonas reinhardtii
Cre10.g439100 1.0kb upstream 1.0kb upstream 5738 true chromosome_10: 2792819-2798556 Chlamydomonas reinhardtii
Cre10.g439100 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2792819-2793818 Chlamydomonas reinhardtii
Cre10.g439100 1.0kb downstream 1.0kb downstream 5738 true chromosome_10: 2793819-2799556 Chlamydomonas reinhardtii
Cre10.g439100 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2798557-2799556 Chlamydomonas reinhardtii
Cre10.g439100 2.0kb upstream 2.0kb upstream 6738 true chromosome_10: 2791819-2798556 Chlamydomonas reinhardtii
Cre10.g439100 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2791819-2793818 Chlamydomonas reinhardtii
Cre10.g439100 2.0kb downstream 2.0kb downstream 6738 true chromosome_10: 2793819-2800556 Chlamydomonas reinhardtii
Cre10.g439100 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2798557-2800556 Chlamydomonas reinhardtii
Cre10.g439100 5.0kb upstream 5.0kb upstream 9738 true chromosome_10: 2788819-2798556 Chlamydomonas reinhardtii
Cre10.g439100 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2788819-2793818 Chlamydomonas reinhardtii
Cre10.g439100 5.0kb downstream 5.0kb downstream 9738 true chromosome_10: 2793819-2803556 Chlamydomonas reinhardtii
Cre10.g439100 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2798557-2803556 Chlamydomonas reinhardtii
Cre10.g439100 10.0kb upstream 10.0kb upstream 14738 true chromosome_10: 2783819-2798556 Chlamydomonas reinhardtii
Cre10.g439100 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2783819-2793818 Chlamydomonas reinhardtii
Cre10.g439100 10.0kb downstream 10.0kb downstream 14738 true chromosome_10: 2793819-2808556 Chlamydomonas reinhardtii
Cre10.g439100 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2798557-2808556 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108640 5260 Chlorophyte View MSA
123423902 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.794        
cufflinks 19.353     High High
cufflinks 15.619     High  
cufflinks 11.827        
cufflinks 16.366     High High
cufflinks 13.21     High  
cufflinks 20.283     High High
cufflinks 15.223        
cufflinks 8.501        
cufflinks 3.505       Low
cufflinks 10.801        
cufflinks 12.074        
cufflinks 5.683        
cufflinks 14.218     High  
cufflinks 8.641        
cufflinks 9.662        
cufflinks 2.658       Low
cufflinks 12.795        
cufflinks 2.709       Low
cufflinks 7.087        
cufflinks 8.577        
cufflinks 2.679       Low
cufflinks 10.637        
cufflinks 10.748        
cufflinks 3.06       Low
cufflinks 37.9274 0.0 76.1524 High Low
cufflinks 45.98 11.0344 80.9255 High  
cufflinks 27.3368 0.0 55.402 High  
cufflinks 26.8077 0.747527 52.8679 High Low
cufflinks 53.7863 4.84327 102.729 High High

0 Strain