Gene : SMC5A C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g440300 Defline:  (1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5
Genomic Order:  491 Name:  ? Cre10.g440300
Secondary Identifier:  ? PAC:30789796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g440300 0.5kb upstream 0.5kb upstream 9446 true chromosome_10: 2921412-2930857 Chlamydomonas reinhardtii
Cre10.g440300 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2930358-2930857 Chlamydomonas reinhardtii
Cre10.g440300 0.5kb downstream 0.5kb downstream 9446 true chromosome_10: 2920912-2930357 Chlamydomonas reinhardtii
Cre10.g440300 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2920912-2921411 Chlamydomonas reinhardtii
Cre10.g440300 1.0kb upstream 1.0kb upstream 9946 true chromosome_10: 2921412-2931357 Chlamydomonas reinhardtii
Cre10.g440300 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2930358-2931357 Chlamydomonas reinhardtii
Cre10.g440300 1.0kb downstream 1.0kb downstream 9946 true chromosome_10: 2920412-2930357 Chlamydomonas reinhardtii
Cre10.g440300 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2920412-2921411 Chlamydomonas reinhardtii
Cre10.g440300 2.0kb upstream 2.0kb upstream 10946 true chromosome_10: 2921412-2932357 Chlamydomonas reinhardtii
Cre10.g440300 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2930358-2932357 Chlamydomonas reinhardtii
Cre10.g440300 2.0kb downstream 2.0kb downstream 10946 true chromosome_10: 2919412-2930357 Chlamydomonas reinhardtii
Cre10.g440300 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2919412-2921411 Chlamydomonas reinhardtii
Cre10.g440300 5.0kb upstream 5.0kb upstream 13946 true chromosome_10: 2921412-2935357 Chlamydomonas reinhardtii
Cre10.g440300 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2930358-2935357 Chlamydomonas reinhardtii
Cre10.g440300 5.0kb downstream 5.0kb downstream 13946 true chromosome_10: 2916412-2930357 Chlamydomonas reinhardtii
Cre10.g440300 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2916412-2921411 Chlamydomonas reinhardtii
Cre10.g440300 10.0kb upstream 10.0kb upstream 18946 true chromosome_10: 2921412-2940357 Chlamydomonas reinhardtii
Cre10.g440300 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2930358-2940357 Chlamydomonas reinhardtii
Cre10.g440300 10.0kb downstream 10.0kb downstream 18946 true chromosome_10: 2911412-2930357 Chlamydomonas reinhardtii
Cre10.g440300 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2911412-2921411 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108922 5260 Chlorophyte View MSA
123424617 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.214       Low
cufflinks 0.506        
cufflinks 0.394        
cufflinks 0.831        
cufflinks 0.493        
cufflinks 0.34        
cufflinks 0.6        
cufflinks 0.632        
cufflinks 0.437        
cufflinks 0.134       Low
cufflinks 0.709        
cufflinks 0.716        
cufflinks 0.206       Low
cufflinks 0.566        
cufflinks 0.54        
cufflinks 0.398        
cufflinks 1.093       High
cufflinks 0.433        
cufflinks 0.12       Low
cufflinks 1.078       High
cufflinks 0.588        
cufflinks 0.765        
cufflinks 0.829        
cufflinks 0.608        
cufflinks 0.726        
cufflinks 5.09121 0.736693 9.44572    
cufflinks 4.3792 1.00001 7.7584    
cufflinks 2.75803 0.0 5.79972    
cufflinks 2.68144 0.444307 4.91858    
cufflinks 5.61029 1.1272 10.0934    

0 Strain