Gene : SMC5B C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g440200 Defline:  (1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5
Genomic Order:  489 Name:  ? Cre10.g440200
Secondary Identifier:  ? PAC:30790391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g440200 0.5kb upstream 0.5kb upstream 9476 true chromosome_10: 2909322-2918797 Chlamydomonas reinhardtii
Cre10.g440200 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2918298-2918797 Chlamydomonas reinhardtii
Cre10.g440200 0.5kb downstream 0.5kb downstream 9476 true chromosome_10: 2908822-2918297 Chlamydomonas reinhardtii
Cre10.g440200 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2908822-2909321 Chlamydomonas reinhardtii
Cre10.g440200 1.0kb upstream 1.0kb upstream 9976 true chromosome_10: 2909322-2919297 Chlamydomonas reinhardtii
Cre10.g440200 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2918298-2919297 Chlamydomonas reinhardtii
Cre10.g440200 1.0kb downstream 1.0kb downstream 9976 true chromosome_10: 2908322-2918297 Chlamydomonas reinhardtii
Cre10.g440200 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2908322-2909321 Chlamydomonas reinhardtii
Cre10.g440200 2.0kb upstream 2.0kb upstream 10976 true chromosome_10: 2909322-2920297 Chlamydomonas reinhardtii
Cre10.g440200 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2918298-2920297 Chlamydomonas reinhardtii
Cre10.g440200 2.0kb downstream 2.0kb downstream 10976 true chromosome_10: 2907322-2918297 Chlamydomonas reinhardtii
Cre10.g440200 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2907322-2909321 Chlamydomonas reinhardtii
Cre10.g440200 5.0kb upstream 5.0kb upstream 13976 true chromosome_10: 2909322-2923297 Chlamydomonas reinhardtii
Cre10.g440200 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2918298-2923297 Chlamydomonas reinhardtii
Cre10.g440200 5.0kb downstream 5.0kb downstream 13976 true chromosome_10: 2904322-2918297 Chlamydomonas reinhardtii
Cre10.g440200 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2904322-2909321 Chlamydomonas reinhardtii
Cre10.g440200 10.0kb upstream 10.0kb upstream 18976 true chromosome_10: 2909322-2928297 Chlamydomonas reinhardtii
Cre10.g440200 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2918298-2928297 Chlamydomonas reinhardtii
Cre10.g440200 10.0kb downstream 10.0kb downstream 18976 true chromosome_10: 2899322-2918297 Chlamydomonas reinhardtii
Cre10.g440200 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2899322-2909321 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108922 5260 Chlorophyte View MSA
123424617 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low Low
cufflinks 1.942        
cufflinks 2.224        
cufflinks 1.715        
cufflinks 0.771        
cufflinks 1.23        
cufflinks 2.785       High
cufflinks 2.81       High
cufflinks 0.034     Low Low
cufflinks 0.106       Low
cufflinks 0.882        
cufflinks 1.171        
cufflinks 0.696        
cufflinks 0.815        
cufflinks 0.793        
cufflinks 0.055     Low Low
cufflinks 0.426        
cufflinks 1.046        
cufflinks 0.035     Low Low
cufflinks 0.388        
cufflinks 0.375        
cufflinks 0.305        
cufflinks 3.95       High
cufflinks 1.372        
cufflinks 0.579        
cufflinks 0.75854 0.0365758 1.4805   Low
cufflinks 1.5178 0.0193055 3.01629    
cufflinks 2.26222 0.0 4.76754    
cufflinks 2.57471 0.436504 4.71292    
cufflinks 2.84434 0.503859 5.18481    

0 Strain