Gene : Cre01.g068742 C. reinhardtii v5.6
Defline:  (1 of 4) PF01424 - R3H domain (R3H) Genomic Order:  1244
Name:  ? Cre01.g068742 Secondary Identifier:  ? PAC:30789645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g068742 0.5kb upstream 0.5kb upstream 5984 true chromosome_1: 7975497-7981480 Chlamydomonas reinhardtii
Cre01.g068742 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 7975497-7975996 Chlamydomonas reinhardtii
Cre01.g068742 0.5kb downstream 0.5kb downstream 5984 true chromosome_1: 7975997-7981980 Chlamydomonas reinhardtii
Cre01.g068742 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 7981481-7981980 Chlamydomonas reinhardtii
Cre01.g068742 1.0kb upstream 1.0kb upstream 6484 true chromosome_1: 7974997-7981480 Chlamydomonas reinhardtii
Cre01.g068742 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 7974997-7975996 Chlamydomonas reinhardtii
Cre01.g068742 1.0kb downstream 1.0kb downstream 6484 true chromosome_1: 7975997-7982480 Chlamydomonas reinhardtii
Cre01.g068742 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 7981481-7982480 Chlamydomonas reinhardtii
Cre01.g068742 2.0kb upstream 2.0kb upstream 7484 true chromosome_1: 7973997-7981480 Chlamydomonas reinhardtii
Cre01.g068742 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 7973997-7975996 Chlamydomonas reinhardtii
Cre01.g068742 2.0kb downstream 2.0kb downstream 7484 true chromosome_1: 7975997-7983480 Chlamydomonas reinhardtii
Cre01.g068742 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 7981481-7983480 Chlamydomonas reinhardtii
Cre01.g068742 5.0kb upstream 5.0kb upstream 10484 true chromosome_1: 7970997-7981480 Chlamydomonas reinhardtii
Cre01.g068742 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 7970997-7975996 Chlamydomonas reinhardtii
Cre01.g068742 5.0kb downstream 5.0kb downstream 10484 true chromosome_1: 7975997-7986480 Chlamydomonas reinhardtii
Cre01.g068742 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 7981481-7986480 Chlamydomonas reinhardtii
Cre01.g068742 10.0kb upstream 10.0kb upstream 15484 true chromosome_1: 7965997-7981480 Chlamydomonas reinhardtii
Cre01.g068742 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 7965997-7975996 Chlamydomonas reinhardtii
Cre01.g068742 10.0kb downstream 10.0kb downstream 15484 true chromosome_1: 7975997-7991480 Chlamydomonas reinhardtii
Cre01.g068742 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 7981481-7991480 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112634 5260 Chlorophyte View MSA
123428874 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.163        
cufflinks 14.597     High  
cufflinks 16.636     High High
cufflinks 17.186     High High
cufflinks 12.528        
cufflinks 12.213        
cufflinks 16.383     High High
cufflinks 17.604     High High
cufflinks 9.71        
cufflinks 3.398       Low
cufflinks 9.997        
cufflinks 13.948        
cufflinks 3.984       Low
cufflinks 12.473        
cufflinks 11.172        
cufflinks 11.655        
cufflinks 7.092        
cufflinks 14.174     High  
cufflinks 3.314       Low
cufflinks 9.016        
cufflinks 12.456        
cufflinks 3.943       Low
cufflinks 9.139        
cufflinks 12.192        
cufflinks 5.371       Low
cufflinks 3.5254 0.581679 6.46911   Low
cufflinks 15.7259 3.88565 27.5661   High
cufflinks 8.68098 0.0 17.4728    
cufflinks 11.577 0.617247 22.5367    
cufflinks 17.5032 2.19054 32.8159    

0 Strain