Gene : Cre01.g057061 C. reinhardtii v5.6
Defline:  (1 of 1) PF08167 - rRNA processing/ribosome biogenesis (RIX1) Genomic Order:  1212
Name:  ? Cre01.g057061 Secondary Identifier:  ? PAC:30788872
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g057061 0.5kb upstream 0.5kb upstream 5882 true chromosome_1: 7822721-7828602 Chlamydomonas reinhardtii
Cre01.g057061 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 7822721-7823220 Chlamydomonas reinhardtii
Cre01.g057061 0.5kb downstream 0.5kb downstream 5882 true chromosome_1: 7823221-7829102 Chlamydomonas reinhardtii
Cre01.g057061 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 7828603-7829102 Chlamydomonas reinhardtii
Cre01.g057061 1.0kb upstream 1.0kb upstream 6382 true chromosome_1: 7822221-7828602 Chlamydomonas reinhardtii
Cre01.g057061 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 7822221-7823220 Chlamydomonas reinhardtii
Cre01.g057061 1.0kb downstream 1.0kb downstream 6382 true chromosome_1: 7823221-7829602 Chlamydomonas reinhardtii
Cre01.g057061 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 7828603-7829602 Chlamydomonas reinhardtii
Cre01.g057061 2.0kb upstream 2.0kb upstream 7382 true chromosome_1: 7821221-7828602 Chlamydomonas reinhardtii
Cre01.g057061 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 7821221-7823220 Chlamydomonas reinhardtii
Cre01.g057061 2.0kb downstream 2.0kb downstream 7382 true chromosome_1: 7823221-7830602 Chlamydomonas reinhardtii
Cre01.g057061 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 7828603-7830602 Chlamydomonas reinhardtii
Cre01.g057061 5.0kb upstream 5.0kb upstream 10382 true chromosome_1: 7818221-7828602 Chlamydomonas reinhardtii
Cre01.g057061 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 7818221-7823220 Chlamydomonas reinhardtii
Cre01.g057061 5.0kb downstream 5.0kb downstream 10382 true chromosome_1: 7823221-7833602 Chlamydomonas reinhardtii
Cre01.g057061 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 7828603-7833602 Chlamydomonas reinhardtii
Cre01.g057061 10.0kb upstream 10.0kb upstream 15382 true chromosome_1: 7813221-7828602 Chlamydomonas reinhardtii
Cre01.g057061 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 7813221-7823220 Chlamydomonas reinhardtii
Cre01.g057061 10.0kb downstream 10.0kb downstream 15382 true chromosome_1: 7823221-7838602 Chlamydomonas reinhardtii
Cre01.g057061 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 7828603-7838602 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112650 5260 Chlorophyte View MSA
123425273 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.317        
cufflinks 0.776        
cufflinks 0.511        
cufflinks 0.686        
cufflinks 0.516        
cufflinks 0.596        
cufflinks 0.679        
cufflinks 0.52        
cufflinks 0.112       Low
cufflinks 0.322        
cufflinks 0.703        
cufflinks 0.601        
cufflinks 0.273        
cufflinks 0.596        
cufflinks 0.448        
cufflinks 0.376        
cufflinks 0.041     Low Low
cufflinks 0.421        
cufflinks 0.627        
cufflinks 0.819        
cufflinks 0.641        
cufflinks 0.117       Low
cufflinks 0.697        
cufflinks 0.432        
cufflinks 0.028     Low Low
cufflinks 5.17639 0.879583 9.47319   High
cufflinks 7.22422 1.64969 12.7988   High
cufflinks 0.368299 0.0 1.11993   Low
cufflinks 2.32225 0.23181 4.41268    
cufflinks 4.24299 0.512814 7.97318    

0 Strain