Gene : CYN20-5 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g417500 Defline:  (1 of 1) PF00160//PF04969 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // CS domain (CS)
Genomic Order:  3 Name:  ? Cre10.g417500
Secondary Identifier:  ? PAC:30790567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g417500 0.5kb upstream 0.5kb upstream 4259 true chromosome_10: 13640-17898 Chlamydomonas reinhardtii
Cre10.g417500 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 17399-17898 Chlamydomonas reinhardtii
Cre10.g417500 0.5kb downstream 0.5kb downstream 4259 true chromosome_10: 13140-17398 Chlamydomonas reinhardtii
Cre10.g417500 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 13140-13639 Chlamydomonas reinhardtii
Cre10.g417500 1.0kb upstream 1.0kb upstream 4759 true chromosome_10: 13640-18398 Chlamydomonas reinhardtii
Cre10.g417500 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 17399-18398 Chlamydomonas reinhardtii
Cre10.g417500 1.0kb downstream 1.0kb downstream 4759 true chromosome_10: 12640-17398 Chlamydomonas reinhardtii
Cre10.g417500 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 12640-13639 Chlamydomonas reinhardtii
Cre10.g417500 2.0kb upstream 2.0kb upstream 5759 true chromosome_10: 13640-19398 Chlamydomonas reinhardtii
Cre10.g417500 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 17399-19398 Chlamydomonas reinhardtii
Cre10.g417500 2.0kb downstream 2.0kb downstream 5759 true chromosome_10: 11640-17398 Chlamydomonas reinhardtii
Cre10.g417500 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 11640-13639 Chlamydomonas reinhardtii
Cre10.g417500 5.0kb upstream 5.0kb upstream 8759 true chromosome_10: 13640-22398 Chlamydomonas reinhardtii
Cre10.g417500 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 17399-22398 Chlamydomonas reinhardtii
Cre10.g417500 5.0kb downstream 5.0kb downstream 8759 true chromosome_10: 8640-17398 Chlamydomonas reinhardtii
Cre10.g417500 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 8640-13639 Chlamydomonas reinhardtii
Cre10.g417500 10.0kb upstream 10.0kb upstream 13759 true chromosome_10: 13640-27398 Chlamydomonas reinhardtii
Cre10.g417500 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 17399-27398 Chlamydomonas reinhardtii
Cre10.g417500 10.0kb downstream 10.0kb downstream 13759 true chromosome_10: 3640-17398 Chlamydomonas reinhardtii
Cre10.g417500 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 3640-13639 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113557 5260 Chlorophyte View MSA
123428973 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.005        
cufflinks 9.883        
cufflinks 10.351       High
cufflinks 8.444        
cufflinks 10.363       High
cufflinks 9.462        
cufflinks 7.997        
cufflinks 8.928        
cufflinks 9.684        
cufflinks 6.622        
cufflinks 8.243        
cufflinks 6.94        
cufflinks 9.384        
cufflinks 9.98        
cufflinks 6.65        
cufflinks 9.46        
cufflinks 4.852       Low
cufflinks 8.837        
cufflinks 4.238       Low
cufflinks 6.086        
cufflinks 7.275        
cufflinks 5.117       Low
cufflinks 6.397        
cufflinks 9.938        
cufflinks 6.087        
cufflinks 10.8181 1.51039 20.1258    
cufflinks 10.8863 2.90744 18.8651   High
cufflinks 8.80268 0.0 17.7554    
cufflinks 9.27565 1.39463 17.1567   Low
cufflinks 12.6832 2.53827 22.8281   High

0 Strain