Gene : MDN2 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g423250 Defline:  (1 of 1) PTHR11540:SF27 - MALATE DEHYDROGENASE, GLYOXYSOMAL-RELATED
Genomic Order:  134 Name:  ? Cre10.g423250
Secondary Identifier:  ? PAC:30790865
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii GLUCONEO-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii GLYOXYLATE-BYPASS Chlamydomonas reinhardtii pathologic  
Creinhardtii P23-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5464 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-561 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5690 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY66-399 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7115 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g423250 0.5kb upstream 0.5kb upstream 4426 true chromosome_10: 798235-802660 Chlamydomonas reinhardtii
Cre10.g423250 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 802161-802660 Chlamydomonas reinhardtii
Cre10.g423250 0.5kb downstream 0.5kb downstream 4426 true chromosome_10: 797735-802160 Chlamydomonas reinhardtii
Cre10.g423250 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 797735-798234 Chlamydomonas reinhardtii
Cre10.g423250 1.0kb upstream 1.0kb upstream 4926 true chromosome_10: 798235-803160 Chlamydomonas reinhardtii
Cre10.g423250 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 802161-803160 Chlamydomonas reinhardtii
Cre10.g423250 1.0kb downstream 1.0kb downstream 4926 true chromosome_10: 797235-802160 Chlamydomonas reinhardtii
Cre10.g423250 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 797235-798234 Chlamydomonas reinhardtii
Cre10.g423250 2.0kb upstream 2.0kb upstream 5926 true chromosome_10: 798235-804160 Chlamydomonas reinhardtii
Cre10.g423250 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 802161-804160 Chlamydomonas reinhardtii
Cre10.g423250 2.0kb downstream 2.0kb downstream 5926 true chromosome_10: 796235-802160 Chlamydomonas reinhardtii
Cre10.g423250 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 796235-798234 Chlamydomonas reinhardtii
Cre10.g423250 5.0kb upstream 5.0kb upstream 8926 true chromosome_10: 798235-807160 Chlamydomonas reinhardtii
Cre10.g423250 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 802161-807160 Chlamydomonas reinhardtii
Cre10.g423250 5.0kb downstream 5.0kb downstream 8926 true chromosome_10: 793235-802160 Chlamydomonas reinhardtii
Cre10.g423250 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 793235-798234 Chlamydomonas reinhardtii
Cre10.g423250 10.0kb upstream 10.0kb upstream 13926 true chromosome_10: 798235-812160 Chlamydomonas reinhardtii
Cre10.g423250 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 802161-812160 Chlamydomonas reinhardtii
Cre10.g423250 10.0kb downstream 10.0kb downstream 13926 true chromosome_10: 788235-802160 Chlamydomonas reinhardtii
Cre10.g423250 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 788235-798234 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098284 5260 Chlorophyte View MSA
123426123 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.599        
cufflinks 17.402     High  
cufflinks 41.627     High High
cufflinks 30.863     High High
cufflinks 18.841     High  
cufflinks 14.684     High  
cufflinks 14.133     High  
cufflinks 15.588        
cufflinks 8.446        
cufflinks 5.491       Low
cufflinks 47.007     High High
cufflinks 12.971        
cufflinks 11.379     High  
cufflinks 18.266     High  
cufflinks 14.848     High  
cufflinks 8.177        
cufflinks 14.711     High  
cufflinks 30.82     High High
cufflinks 2.41       Low
cufflinks 18.932     High  
cufflinks 12.862     High  
cufflinks 10.696        
cufflinks 7.566        
cufflinks 26.064     High  
cufflinks 10.001        
cufflinks 23.7013 1.73478 45.6677 High Low
cufflinks 79.8682 16.3608 143.376 High High
cufflinks 9.1088 0.0 18.502   Low
cufflinks 30.3829 1.35967 59.4062 High  
cufflinks 33.3464 4.58955 62.1032 High  

0 Strain