Gene : PBB1 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g424400 Defline:  (1 of 1) K02739 - 20S proteasome subunit beta 2 (PSMB7)
Genomic Order:  157 Name:  ? Cre10.g424400
Secondary Identifier:  ? PAC:30789754
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g424400 0.5kb upstream 0.5kb upstream 3359 true chromosome_10: 915701-919059 Chlamydomonas reinhardtii
Cre10.g424400 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 915701-916200 Chlamydomonas reinhardtii
Cre10.g424400 0.5kb downstream 0.5kb downstream 3359 true chromosome_10: 916201-919559 Chlamydomonas reinhardtii
Cre10.g424400 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 919060-919559 Chlamydomonas reinhardtii
Cre10.g424400 1.0kb upstream 1.0kb upstream 3859 true chromosome_10: 915201-919059 Chlamydomonas reinhardtii
Cre10.g424400 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 915201-916200 Chlamydomonas reinhardtii
Cre10.g424400 1.0kb downstream 1.0kb downstream 3859 true chromosome_10: 916201-920059 Chlamydomonas reinhardtii
Cre10.g424400 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 919060-920059 Chlamydomonas reinhardtii
Cre10.g424400 2.0kb upstream 2.0kb upstream 4859 true chromosome_10: 914201-919059 Chlamydomonas reinhardtii
Cre10.g424400 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 914201-916200 Chlamydomonas reinhardtii
Cre10.g424400 2.0kb downstream 2.0kb downstream 4859 true chromosome_10: 916201-921059 Chlamydomonas reinhardtii
Cre10.g424400 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 919060-921059 Chlamydomonas reinhardtii
Cre10.g424400 5.0kb upstream 5.0kb upstream 7859 true chromosome_10: 911201-919059 Chlamydomonas reinhardtii
Cre10.g424400 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 911201-916200 Chlamydomonas reinhardtii
Cre10.g424400 5.0kb downstream 5.0kb downstream 7859 true chromosome_10: 916201-924059 Chlamydomonas reinhardtii
Cre10.g424400 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 919060-924059 Chlamydomonas reinhardtii
Cre10.g424400 10.0kb upstream 10.0kb upstream 12859 true chromosome_10: 906201-919059 Chlamydomonas reinhardtii
Cre10.g424400 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 906201-916200 Chlamydomonas reinhardtii
Cre10.g424400 10.0kb downstream 10.0kb downstream 12859 true chromosome_10: 916201-929059 Chlamydomonas reinhardtii
Cre10.g424400 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 919060-929059 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108711 5260 Chlorophyte View MSA
123428515 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.098     High  
cufflinks 41.512     High  
cufflinks 44.459     High High
cufflinks 37.169     High  
cufflinks 39.312     High  
cufflinks 39.6     High  
cufflinks 44.599     High High
cufflinks 40.785     High  
cufflinks 17.988     High  
cufflinks 18.835     High  
cufflinks 29.21     High  
cufflinks 30.247     High  
cufflinks 30.597     High  
cufflinks 39.208     High  
cufflinks 22.588     High  
cufflinks 26.358     High  
cufflinks 7.828       Low
cufflinks 35.421     High  
cufflinks 7.8     High Low
cufflinks 19.838     High  
cufflinks 20.205     High  
cufflinks 6.993       Low
cufflinks 30.807     High  
cufflinks 36.507     High  
cufflinks 6.973       Low
cufflinks 45.8345 0.845835 90.8231 High Low
cufflinks 75.6963 16.6583 134.734 High  
cufflinks 71.5954 0.0 147.522 High  
cufflinks 34.3159 1.6382 66.9935 High Low
cufflinks 91.9025 6.99015 176.815 High  

0 Strain