Gene : Cre10.g423950 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12952//PTHR12952:SF0 - SYS1 // PROTEIN SYS1 HOMOLOG-RELATED Genomic Order:  148
Name:  ? Cre10.g423950 Secondary Identifier:  ? PAC:30790309
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g423950 0.5kb upstream 0.5kb upstream 3357 true chromosome_10: 875356-878712 Chlamydomonas reinhardtii
Cre10.g423950 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 875356-875855 Chlamydomonas reinhardtii
Cre10.g423950 0.5kb downstream 0.5kb downstream 3357 true chromosome_10: 875856-879212 Chlamydomonas reinhardtii
Cre10.g423950 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 878713-879212 Chlamydomonas reinhardtii
Cre10.g423950 1.0kb upstream 1.0kb upstream 3857 true chromosome_10: 874856-878712 Chlamydomonas reinhardtii
Cre10.g423950 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 874856-875855 Chlamydomonas reinhardtii
Cre10.g423950 1.0kb downstream 1.0kb downstream 3857 true chromosome_10: 875856-879712 Chlamydomonas reinhardtii
Cre10.g423950 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 878713-879712 Chlamydomonas reinhardtii
Cre10.g423950 2.0kb upstream 2.0kb upstream 4857 true chromosome_10: 873856-878712 Chlamydomonas reinhardtii
Cre10.g423950 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 873856-875855 Chlamydomonas reinhardtii
Cre10.g423950 2.0kb downstream 2.0kb downstream 4857 true chromosome_10: 875856-880712 Chlamydomonas reinhardtii
Cre10.g423950 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 878713-880712 Chlamydomonas reinhardtii
Cre10.g423950 5.0kb upstream 5.0kb upstream 7857 true chromosome_10: 870856-878712 Chlamydomonas reinhardtii
Cre10.g423950 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 870856-875855 Chlamydomonas reinhardtii
Cre10.g423950 5.0kb downstream 5.0kb downstream 7857 true chromosome_10: 875856-883712 Chlamydomonas reinhardtii
Cre10.g423950 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 878713-883712 Chlamydomonas reinhardtii
Cre10.g423950 10.0kb upstream 10.0kb upstream 12857 true chromosome_10: 865856-878712 Chlamydomonas reinhardtii
Cre10.g423950 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 865856-875855 Chlamydomonas reinhardtii
Cre10.g423950 10.0kb downstream 10.0kb downstream 12857 true chromosome_10: 875856-888712 Chlamydomonas reinhardtii
Cre10.g423950 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 878713-888712 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098063 5260 Chlorophyte View MSA
123428394 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.1        
cufflinks 10.259       High
cufflinks 9.133        
cufflinks 7.436        
cufflinks 9.271        
cufflinks 9.621        
cufflinks 11.799       High
cufflinks 9.741        
cufflinks 7.077        
cufflinks 6.628        
cufflinks 4.554       Low
cufflinks 7.81        
cufflinks 13.008     High High
cufflinks 9.407        
cufflinks 6.623        
cufflinks 7.698        
cufflinks 5.883       Low
cufflinks 7.398        
cufflinks 6.017     High Low
cufflinks 10.189       High
cufflinks 6.516        
cufflinks 6.603        
cufflinks 10.312       High
cufflinks 7.683        
cufflinks 6.498        
cufflinks 9.72941 1.64684 17.812    
cufflinks 8.92686 1.80487 16.0489    
cufflinks 22.2299 0.0 44.6876    
cufflinks 7.92696 1.33993 14.514    
cufflinks 12.2656 2.40545 22.1258    

0 Strain