Gene : TF2A4 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g424150 Defline:  (1 of 1) K03123 - transcription initiation factor TFIIA small subunit (TFIIA2, GTF2A2, TOA2)
Genomic Order:  152 Name:  ? Cre10.g424150
Secondary Identifier:  ? PAC:30790793
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g424150 0.5kb upstream 0.5kb upstream 2554 true chromosome_10: 892541-895094 Chlamydomonas reinhardtii
Cre10.g424150 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 892541-893040 Chlamydomonas reinhardtii
Cre10.g424150 0.5kb downstream 0.5kb downstream 2554 true chromosome_10: 893041-895594 Chlamydomonas reinhardtii
Cre10.g424150 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 895095-895594 Chlamydomonas reinhardtii
Cre10.g424150 1.0kb upstream 1.0kb upstream 3054 true chromosome_10: 892041-895094 Chlamydomonas reinhardtii
Cre10.g424150 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 892041-893040 Chlamydomonas reinhardtii
Cre10.g424150 1.0kb downstream 1.0kb downstream 3054 true chromosome_10: 893041-896094 Chlamydomonas reinhardtii
Cre10.g424150 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 895095-896094 Chlamydomonas reinhardtii
Cre10.g424150 2.0kb upstream 2.0kb upstream 4054 true chromosome_10: 891041-895094 Chlamydomonas reinhardtii
Cre10.g424150 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 891041-893040 Chlamydomonas reinhardtii
Cre10.g424150 2.0kb downstream 2.0kb downstream 4054 true chromosome_10: 893041-897094 Chlamydomonas reinhardtii
Cre10.g424150 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 895095-897094 Chlamydomonas reinhardtii
Cre10.g424150 5.0kb upstream 5.0kb upstream 7054 true chromosome_10: 888041-895094 Chlamydomonas reinhardtii
Cre10.g424150 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 888041-893040 Chlamydomonas reinhardtii
Cre10.g424150 5.0kb downstream 5.0kb downstream 7054 true chromosome_10: 893041-900094 Chlamydomonas reinhardtii
Cre10.g424150 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 895095-900094 Chlamydomonas reinhardtii
Cre10.g424150 10.0kb upstream 10.0kb upstream 12054 true chromosome_10: 883041-895094 Chlamydomonas reinhardtii
Cre10.g424150 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 883041-893040 Chlamydomonas reinhardtii
Cre10.g424150 10.0kb downstream 10.0kb downstream 12054 true chromosome_10: 893041-905094 Chlamydomonas reinhardtii
Cre10.g424150 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 895095-905094 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108515 5260 Chlorophyte View MSA
123423825 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.21     High  
cufflinks 28.628     High  
cufflinks 31.749     High High
cufflinks 28.272     High  
cufflinks 26.857     High  
cufflinks 25.163     High  
cufflinks 34.4     High High
cufflinks 27.331     High  
cufflinks 16.062     High  
cufflinks 12.089     High Low
cufflinks 28.322     High  
cufflinks 24.919     High  
cufflinks 19.829     High  
cufflinks 25.73     High  
cufflinks 22.313     High  
cufflinks 23.479     High  
cufflinks 16.686     High  
cufflinks 25.417     High  
cufflinks 7.355     High Low
cufflinks 21.977     High  
cufflinks 20.099     High  
cufflinks 18.074     High  
cufflinks 17.291     High  
cufflinks 28.557     High  
cufflinks 15.559     High  
cufflinks 11.5059 1.8475 21.1643   Low
cufflinks 23.4694 6.36977 40.569    
cufflinks 29.53 0.0 59.5491 High  
cufflinks 21.1276 2.13047 40.1246    
cufflinks 29.4073 5.26024 53.5544 High  

0 Strain