Gene : SRR26 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g423850 Defline:  (1 of 1) PTHR19331//PTHR19331:SF325 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  146 Name:  ? Cre10.g423850
Secondary Identifier:  ? PAC:30790473
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g423850 0.5kb upstream 0.5kb upstream 5734 true chromosome_10: 867309-873042 Chlamydomonas reinhardtii
Cre10.g423850 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 867309-867808 Chlamydomonas reinhardtii
Cre10.g423850 0.5kb downstream 0.5kb downstream 5734 true chromosome_10: 867809-873542 Chlamydomonas reinhardtii
Cre10.g423850 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 873043-873542 Chlamydomonas reinhardtii
Cre10.g423850 1.0kb upstream 1.0kb upstream 6234 true chromosome_10: 866809-873042 Chlamydomonas reinhardtii
Cre10.g423850 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 866809-867808 Chlamydomonas reinhardtii
Cre10.g423850 1.0kb downstream 1.0kb downstream 6234 true chromosome_10: 867809-874042 Chlamydomonas reinhardtii
Cre10.g423850 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 873043-874042 Chlamydomonas reinhardtii
Cre10.g423850 2.0kb upstream 2.0kb upstream 7234 true chromosome_10: 865809-873042 Chlamydomonas reinhardtii
Cre10.g423850 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 865809-867808 Chlamydomonas reinhardtii
Cre10.g423850 2.0kb downstream 2.0kb downstream 7234 true chromosome_10: 867809-875042 Chlamydomonas reinhardtii
Cre10.g423850 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 873043-875042 Chlamydomonas reinhardtii
Cre10.g423850 5.0kb upstream 5.0kb upstream 10234 true chromosome_10: 862809-873042 Chlamydomonas reinhardtii
Cre10.g423850 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 862809-867808 Chlamydomonas reinhardtii
Cre10.g423850 5.0kb downstream 5.0kb downstream 10234 true chromosome_10: 867809-878042 Chlamydomonas reinhardtii
Cre10.g423850 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 873043-878042 Chlamydomonas reinhardtii
Cre10.g423850 10.0kb upstream 10.0kb upstream 15234 true chromosome_10: 857809-873042 Chlamydomonas reinhardtii
Cre10.g423850 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 857809-867808 Chlamydomonas reinhardtii
Cre10.g423850 10.0kb downstream 10.0kb downstream 15234 true chromosome_10: 867809-883042 Chlamydomonas reinhardtii
Cre10.g423850 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 873043-883042 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086238 5260 Chlorophyte View MSA
123403617 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279       Low
cufflinks 4.809        
cufflinks 5.962       High
cufflinks 4.547        
cufflinks 2.04        
cufflinks 2.684        
cufflinks 5.315        
cufflinks 4.543        
cufflinks 0.209       Low
cufflinks 0.253       Low
cufflinks 4.745        
cufflinks 5.14        
cufflinks 1.606        
cufflinks 2.895        
cufflinks 4.651        
cufflinks 0.248       Low
cufflinks 0.202       Low
cufflinks 2.204        
cufflinks 0.389       Low
cufflinks 1.651        
cufflinks 1.718        
cufflinks 0.592        
cufflinks 9.716       High
cufflinks 2.5        
cufflinks 0.397       Low
cufflinks 0.913229 0.0 2.09431   Low
cufflinks 6.96629 0.551937 13.3806    
cufflinks 5.63597 0.0 11.4136    
cufflinks 4.10411 0.0 8.27156    
cufflinks 3.85575 0.0 7.95699    

0 Strain