Gene : Cre10.g428678 C. reinhardtii v5.6
Defline:  (1 of 1) K03495 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme (gidA, mnmG, MTO1) Genomic Order:  248
Name:  ? Cre10.g428678 Secondary Identifier:  ? PAC:30790870
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g428678 0.5kb upstream 0.5kb upstream 7418 true chromosome_10: 1463991-1471408 Chlamydomonas reinhardtii
Cre10.g428678 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 1463991-1464490 Chlamydomonas reinhardtii
Cre10.g428678 0.5kb downstream 0.5kb downstream 7418 true chromosome_10: 1464491-1471908 Chlamydomonas reinhardtii
Cre10.g428678 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 1471409-1471908 Chlamydomonas reinhardtii
Cre10.g428678 1.0kb upstream 1.0kb upstream 7918 true chromosome_10: 1463491-1471408 Chlamydomonas reinhardtii
Cre10.g428678 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 1463491-1464490 Chlamydomonas reinhardtii
Cre10.g428678 1.0kb downstream 1.0kb downstream 7918 true chromosome_10: 1464491-1472408 Chlamydomonas reinhardtii
Cre10.g428678 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 1471409-1472408 Chlamydomonas reinhardtii
Cre10.g428678 2.0kb upstream 2.0kb upstream 8918 true chromosome_10: 1462491-1471408 Chlamydomonas reinhardtii
Cre10.g428678 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 1462491-1464490 Chlamydomonas reinhardtii
Cre10.g428678 2.0kb downstream 2.0kb downstream 8918 true chromosome_10: 1464491-1473408 Chlamydomonas reinhardtii
Cre10.g428678 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 1471409-1473408 Chlamydomonas reinhardtii
Cre10.g428678 5.0kb upstream 5.0kb upstream 11918 true chromosome_10: 1459491-1471408 Chlamydomonas reinhardtii
Cre10.g428678 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 1459491-1464490 Chlamydomonas reinhardtii
Cre10.g428678 5.0kb downstream 5.0kb downstream 11918 true chromosome_10: 1464491-1476408 Chlamydomonas reinhardtii
Cre10.g428678 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 1471409-1476408 Chlamydomonas reinhardtii
Cre10.g428678 10.0kb upstream 10.0kb upstream 16918 true chromosome_10: 1454491-1471408 Chlamydomonas reinhardtii
Cre10.g428678 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 1454491-1464490 Chlamydomonas reinhardtii
Cre10.g428678 10.0kb downstream 10.0kb downstream 16918 true chromosome_10: 1464491-1481408 Chlamydomonas reinhardtii
Cre10.g428678 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 1471409-1481408 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109769 5260 Chlorophyte View MSA
123424539 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.012        
cufflinks 1.546        
cufflinks 0.974        
cufflinks 1.875        
cufflinks 1.306        
cufflinks 1.358        
cufflinks 1.503        
cufflinks 2.192       High
cufflinks 1.183        
cufflinks 0.457       Low
cufflinks 2.658       High
cufflinks 1.621        
cufflinks 0.935        
cufflinks 1.559        
cufflinks 1.547        
cufflinks 1.448        
cufflinks 0.764       Low
cufflinks 1.094        
cufflinks 0.708       Low
cufflinks 2.072        
cufflinks 1.567        
cufflinks 1.379        
cufflinks 2.374       High
cufflinks 2.826       High
cufflinks 0.849       Low
cufflinks 12.5725 1.23024 23.9148   Low
cufflinks 9.0063 2.36621 15.6464    
cufflinks 1.16958 0.0 2.87109    
cufflinks 3.76257 0.607569 6.91757   Low
cufflinks 4.87331 0.869358 8.87726    

0 Strain