Gene : SRR16 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g458350 Defline:  (1 of 1) PF00059//PF00530//PF00704//PF03762//PF14295 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // Vitelline membrane outer layer protein I (VOMI) (VOMI) // PAN domain (PAN_4)
Genomic Order:  883 Name:  ? Cre10.g458350
Secondary Identifier:  ? PAC:30790173
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g458350 0.5kb upstream 0.5kb upstream 59792 true chromosome_10: 5373237-5433028 Chlamydomonas reinhardtii
Cre10.g458350 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 5373237-5373736 Chlamydomonas reinhardtii
Cre10.g458350 0.5kb downstream 0.5kb downstream 59792 true chromosome_10: 5373737-5433528 Chlamydomonas reinhardtii
Cre10.g458350 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 5433029-5433528 Chlamydomonas reinhardtii
Cre10.g458350 1.0kb upstream 1.0kb upstream 60292 true chromosome_10: 5372737-5433028 Chlamydomonas reinhardtii
Cre10.g458350 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 5372737-5373736 Chlamydomonas reinhardtii
Cre10.g458350 1.0kb downstream 1.0kb downstream 60292 true chromosome_10: 5373737-5434028 Chlamydomonas reinhardtii
Cre10.g458350 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 5433029-5434028 Chlamydomonas reinhardtii
Cre10.g458350 2.0kb upstream 2.0kb upstream 61292 true chromosome_10: 5371737-5433028 Chlamydomonas reinhardtii
Cre10.g458350 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 5371737-5373736 Chlamydomonas reinhardtii
Cre10.g458350 2.0kb downstream 2.0kb downstream 61292 true chromosome_10: 5373737-5435028 Chlamydomonas reinhardtii
Cre10.g458350 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 5433029-5435028 Chlamydomonas reinhardtii
Cre10.g458350 5.0kb upstream 5.0kb upstream 64292 true chromosome_10: 5368737-5433028 Chlamydomonas reinhardtii
Cre10.g458350 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 5368737-5373736 Chlamydomonas reinhardtii
Cre10.g458350 5.0kb downstream 5.0kb downstream 64292 true chromosome_10: 5373737-5438028 Chlamydomonas reinhardtii
Cre10.g458350 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 5433029-5438028 Chlamydomonas reinhardtii
Cre10.g458350 10.0kb upstream 10.0kb upstream 69292 true chromosome_10: 5363737-5433028 Chlamydomonas reinhardtii
Cre10.g458350 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 5363737-5373736 Chlamydomonas reinhardtii
Cre10.g458350 10.0kb downstream 10.0kb downstream 69292 true chromosome_10: 5373737-5443028 Chlamydomonas reinhardtii
Cre10.g458350 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 5433029-5443028 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080610 5260 Chlorophyte Singleton cluster - no MSA
123398385 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low  
cufflinks 0.104     Low  
cufflinks 0.171     Low  
cufflinks 0.179     Low  
cufflinks 0.073     Low  
cufflinks 0.048     Low  
cufflinks 0.157     Low  
cufflinks 0.216     Low  
cufflinks 0.028     Low  
cufflinks 0.005     Low Low
cufflinks 0.735       High
cufflinks 0.222     Low  
cufflinks 0.023     Low  
cufflinks 0.045     Low  
cufflinks 0.531       High
cufflinks 0.011     Low Low
cufflinks 0.016     Low Low
cufflinks 0.094     Low  
cufflinks 0.023     Low  
cufflinks 0.085     Low  
cufflinks 0.233        
cufflinks 0.18        
cufflinks 0.031     Low  
cufflinks 0.489       High
cufflinks 0.095     Low  
cufflinks 0.928314 0.0 1.87956    
cufflinks 1.09867 0.153518 2.04383    
cufflinks 0.687901 0.0 1.65079   High
cufflinks 0.784028 0.0433761 1.52468    
cufflinks 1.15887 0.119954 2.19779   High

0 Strain