Gene : SRR31 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g458800 Defline:  Scavenger receptor cysteine rich (SRCR) protein
Genomic Order:  893 Name:  ? Cre10.g458800
Secondary Identifier:  ? PAC:30790773
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g458800 0.5kb upstream 0.5kb upstream 5902 true chromosome_10: 5461597-5467498 Chlamydomonas reinhardtii
Cre10.g458800 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 5461597-5462096 Chlamydomonas reinhardtii
Cre10.g458800 0.5kb downstream 0.5kb downstream 5902 true chromosome_10: 5462097-5467998 Chlamydomonas reinhardtii
Cre10.g458800 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 5467499-5467998 Chlamydomonas reinhardtii
Cre10.g458800 1.0kb upstream 1.0kb upstream 6402 true chromosome_10: 5461097-5467498 Chlamydomonas reinhardtii
Cre10.g458800 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 5461097-5462096 Chlamydomonas reinhardtii
Cre10.g458800 1.0kb downstream 1.0kb downstream 6402 true chromosome_10: 5462097-5468498 Chlamydomonas reinhardtii
Cre10.g458800 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 5467499-5468498 Chlamydomonas reinhardtii
Cre10.g458800 2.0kb upstream 2.0kb upstream 7402 true chromosome_10: 5460097-5467498 Chlamydomonas reinhardtii
Cre10.g458800 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 5460097-5462096 Chlamydomonas reinhardtii
Cre10.g458800 2.0kb downstream 2.0kb downstream 7402 true chromosome_10: 5462097-5469498 Chlamydomonas reinhardtii
Cre10.g458800 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 5467499-5469498 Chlamydomonas reinhardtii
Cre10.g458800 5.0kb upstream 5.0kb upstream 10402 true chromosome_10: 5457097-5467498 Chlamydomonas reinhardtii
Cre10.g458800 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 5457097-5462096 Chlamydomonas reinhardtii
Cre10.g458800 5.0kb downstream 5.0kb downstream 10402 true chromosome_10: 5462097-5472498 Chlamydomonas reinhardtii
Cre10.g458800 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 5467499-5472498 Chlamydomonas reinhardtii
Cre10.g458800 10.0kb upstream 10.0kb upstream 15402 true chromosome_10: 5452097-5467498 Chlamydomonas reinhardtii
Cre10.g458800 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 5452097-5462096 Chlamydomonas reinhardtii
Cre10.g458800 10.0kb downstream 10.0kb downstream 15402 true chromosome_10: 5462097-5477498 Chlamydomonas reinhardtii
Cre10.g458800 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 5467499-5477498 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076738 5260 Chlorophyte View MSA
123394802 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.902     High  
cufflinks 13.792        
cufflinks 16.632     High  
cufflinks 25.397     High High
cufflinks 9.812        
cufflinks 10.262        
cufflinks 11.704        
cufflinks 15.053        
cufflinks 11.585     High  
cufflinks 5.872       Low
cufflinks 36.397     High High
cufflinks 20.038     High  
cufflinks 7.972       Low
cufflinks 17.122     High  
cufflinks 16.302     High  
cufflinks 12.503     High  
cufflinks 14.016     High  
cufflinks 12.602        
cufflinks 2.95       Low
cufflinks 11.531        
cufflinks 15.087     High  
cufflinks 14.776     High  
cufflinks 12.762        
cufflinks 16.642     High  
cufflinks 10.826        
cufflinks 10.0933 1.22181 18.9648   High
cufflinks 12.286 3.35558 21.2165    
cufflinks 8.23652 0.0 16.5878    
cufflinks 8.05199 1.13093 14.973    
cufflinks 39.0326 4.05936 74.0059 High  

0 Strain