Gene : Cre10.g460100 C. reinhardtii v5.6
Defline:  (1 of 1) KOG0265//KOG0271//KOG0296//KOG0645//KOG1407 - U5 snRNP-specific protein-like factor and related proteins // Notchless-like WD40 repeat-containing protein // Angio-associated migratory cell protein (contains WD40 repeats) // WD40 repeat protein // WD40 repeat protein Genomic Order:  920
Name:  ? Cre10.g460100 Secondary Identifier:  ? PAC:30790550
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g460100 0.5kb upstream 0.5kb upstream 11326 true chromosome_10: 5607777-5619102 Chlamydomonas reinhardtii
Cre10.g460100 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 5618603-5619102 Chlamydomonas reinhardtii
Cre10.g460100 0.5kb downstream 0.5kb downstream 11326 true chromosome_10: 5607277-5618602 Chlamydomonas reinhardtii
Cre10.g460100 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 5607277-5607776 Chlamydomonas reinhardtii
Cre10.g460100 1.0kb upstream 1.0kb upstream 11826 true chromosome_10: 5607777-5619602 Chlamydomonas reinhardtii
Cre10.g460100 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 5618603-5619602 Chlamydomonas reinhardtii
Cre10.g460100 1.0kb downstream 1.0kb downstream 11826 true chromosome_10: 5606777-5618602 Chlamydomonas reinhardtii
Cre10.g460100 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 5606777-5607776 Chlamydomonas reinhardtii
Cre10.g460100 2.0kb upstream 2.0kb upstream 12826 true chromosome_10: 5607777-5620602 Chlamydomonas reinhardtii
Cre10.g460100 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 5618603-5620602 Chlamydomonas reinhardtii
Cre10.g460100 2.0kb downstream 2.0kb downstream 12826 true chromosome_10: 5605777-5618602 Chlamydomonas reinhardtii
Cre10.g460100 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 5605777-5607776 Chlamydomonas reinhardtii
Cre10.g460100 5.0kb upstream 5.0kb upstream 15826 true chromosome_10: 5607777-5623602 Chlamydomonas reinhardtii
Cre10.g460100 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 5618603-5623602 Chlamydomonas reinhardtii
Cre10.g460100 5.0kb downstream 5.0kb downstream 15826 true chromosome_10: 5602777-5618602 Chlamydomonas reinhardtii
Cre10.g460100 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 5602777-5607776 Chlamydomonas reinhardtii
Cre10.g460100 10.0kb upstream 10.0kb upstream 20826 true chromosome_10: 5607777-5628602 Chlamydomonas reinhardtii
Cre10.g460100 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 5618603-5628602 Chlamydomonas reinhardtii
Cre10.g460100 10.0kb downstream 10.0kb downstream 20826 true chromosome_10: 5597777-5618602 Chlamydomonas reinhardtii
Cre10.g460100 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 5597777-5607776 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076142 5260 Chlorophyte View MSA
123394261 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216       Low
cufflinks 1.726       High
cufflinks 0.632        
cufflinks 0.636        
cufflinks 1.321       High
cufflinks 0.696        
cufflinks 2.54       High
cufflinks 0.922        
cufflinks 0.402        
cufflinks 0.131       Low
cufflinks 0.818        
cufflinks 0.724        
cufflinks 0.146       Low
cufflinks 0.496        
cufflinks 1.086        
cufflinks 0.197       Low
cufflinks 0.463        
cufflinks 0.909        
cufflinks 0.24       Low
cufflinks 0.759        
cufflinks 1.254        
cufflinks 0.645        
cufflinks 0.625        
cufflinks 0.857        
cufflinks 0.778        
cufflinks 0.0368629 0.0 0.0897796 Low Low
cufflinks 3.40091 0.903094 5.89872    
cufflinks 1.30749 0.0 2.7939    
cufflinks 0.691562 0.0557793 1.32735   High
cufflinks 1.47204 0.225998 2.71808    

0 Strain