Gene : Cre10.g467100 C. reinhardtii v5.6
Defline:  (1 of 2) PF04410 - Gar1/Naf1 RNA binding region (Gar1) Genomic Order:  1079
Name:  ? Cre10.g467100 Secondary Identifier:  ? PAC:30790916
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g467100 0.5kb upstream 0.5kb upstream 4518 true chromosome_10: 6543375-6547892 Chlamydomonas reinhardtii
Cre10.g467100 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 6547393-6547892 Chlamydomonas reinhardtii
Cre10.g467100 0.5kb downstream 0.5kb downstream 4518 true chromosome_10: 6542875-6547392 Chlamydomonas reinhardtii
Cre10.g467100 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 6542875-6543374 Chlamydomonas reinhardtii
Cre10.g467100 1.0kb upstream 1.0kb upstream 5018 true chromosome_10: 6543375-6548392 Chlamydomonas reinhardtii
Cre10.g467100 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 6547393-6548392 Chlamydomonas reinhardtii
Cre10.g467100 1.0kb downstream 1.0kb downstream 5018 true chromosome_10: 6542375-6547392 Chlamydomonas reinhardtii
Cre10.g467100 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 6542375-6543374 Chlamydomonas reinhardtii
Cre10.g467100 2.0kb upstream 2.0kb upstream 6018 true chromosome_10: 6543375-6549392 Chlamydomonas reinhardtii
Cre10.g467100 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 6547393-6549392 Chlamydomonas reinhardtii
Cre10.g467100 2.0kb downstream 2.0kb downstream 6018 true chromosome_10: 6541375-6547392 Chlamydomonas reinhardtii
Cre10.g467100 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 6541375-6543374 Chlamydomonas reinhardtii
Cre10.g467100 5.0kb upstream 5.0kb upstream 9018 true chromosome_10: 6543375-6552392 Chlamydomonas reinhardtii
Cre10.g467100 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 6547393-6552392 Chlamydomonas reinhardtii
Cre10.g467100 5.0kb downstream 5.0kb downstream 9018 true chromosome_10: 6538375-6547392 Chlamydomonas reinhardtii
Cre10.g467100 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 6538375-6543374 Chlamydomonas reinhardtii
Cre10.g467100 10.0kb upstream 10.0kb upstream 14018 true chromosome_10: 6543375-6557392 Chlamydomonas reinhardtii
Cre10.g467100 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 6547393-6557392 Chlamydomonas reinhardtii
Cre10.g467100 10.0kb downstream 10.0kb downstream 14018 true chromosome_10: 6533375-6547392 Chlamydomonas reinhardtii
Cre10.g467100 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 6533375-6543374 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110362 5260 Chlorophyte View MSA
123424387 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.816        
cufflinks 0.964        
cufflinks 4.831        
cufflinks 3.4        
cufflinks 4.07        
cufflinks 3.231        
cufflinks 3.284        
cufflinks 4.003        
cufflinks 1.316        
cufflinks 1.408        
cufflinks 4.758        
cufflinks 4.234        
cufflinks 1.996        
cufflinks 3.707        
cufflinks 3.278        
cufflinks 2.188        
cufflinks 0.111     Low Low
cufflinks 2.785        
cufflinks 1.897        
cufflinks 3.893        
cufflinks 3.643        
cufflinks 0.208       Low
cufflinks 4.26        
cufflinks 3.625        
cufflinks 0.13       Low
cufflinks 7.06213 1.1016 13.0227    
cufflinks 9.50347 2.53116 16.4758    
cufflinks 3.12772 0.0 6.73335    
cufflinks 6.8067 1.07843 12.535    
cufflinks 11.9364 2.2991 21.5737   High

0 Strain