Gene : Cre11.g467547 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR11451:SF37 - PROTEIN EARS-1 Genomic Order:  26
Name:  ? Cre11.g467547 Secondary Identifier:  ? PAC:30775820
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5188 Chlamydomonas reinhardtii pathologic  
Creinhardtii TRNA-CHARGING-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g467547 0.5kb upstream 0.5kb upstream 5756 true chromosome_11: 167146-172901 Chlamydomonas reinhardtii
Cre11.g467547 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 167146-167645 Chlamydomonas reinhardtii
Cre11.g467547 0.5kb downstream 0.5kb downstream 5756 true chromosome_11: 167646-173401 Chlamydomonas reinhardtii
Cre11.g467547 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 172902-173401 Chlamydomonas reinhardtii
Cre11.g467547 1.0kb upstream 1.0kb upstream 6256 true chromosome_11: 166646-172901 Chlamydomonas reinhardtii
Cre11.g467547 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 166646-167645 Chlamydomonas reinhardtii
Cre11.g467547 1.0kb downstream 1.0kb downstream 6256 true chromosome_11: 167646-173901 Chlamydomonas reinhardtii
Cre11.g467547 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 172902-173901 Chlamydomonas reinhardtii
Cre11.g467547 2.0kb upstream 2.0kb upstream 7256 true chromosome_11: 165646-172901 Chlamydomonas reinhardtii
Cre11.g467547 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 165646-167645 Chlamydomonas reinhardtii
Cre11.g467547 2.0kb downstream 2.0kb downstream 7256 true chromosome_11: 167646-174901 Chlamydomonas reinhardtii
Cre11.g467547 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 172902-174901 Chlamydomonas reinhardtii
Cre11.g467547 5.0kb upstream 5.0kb upstream 10256 true chromosome_11: 162646-172901 Chlamydomonas reinhardtii
Cre11.g467547 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 162646-167645 Chlamydomonas reinhardtii
Cre11.g467547 5.0kb downstream 5.0kb downstream 10256 true chromosome_11: 167646-177901 Chlamydomonas reinhardtii
Cre11.g467547 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 172902-177901 Chlamydomonas reinhardtii
Cre11.g467547 10.0kb upstream 10.0kb upstream 15256 true chromosome_11: 157646-172901 Chlamydomonas reinhardtii
Cre11.g467547 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 157646-167645 Chlamydomonas reinhardtii
Cre11.g467547 10.0kb downstream 10.0kb downstream 15256 true chromosome_11: 167646-182901 Chlamydomonas reinhardtii
Cre11.g467547 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 172902-182901 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109823 5260 Chlorophyte View MSA
123426828 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.245     High High
cufflinks 25.927     High High
cufflinks 8.389        
cufflinks 5.318       Low
cufflinks 15.867     High  
cufflinks 15.115     High  
cufflinks 15.714     High  
cufflinks 10.143        
cufflinks 21.521     High High
cufflinks 8.752     High  
cufflinks 4.984       Low
cufflinks 9.979        
cufflinks 8.417        
cufflinks 15.866     High  
cufflinks 10.451        
cufflinks 21.825     High High
cufflinks 2.954       Low
cufflinks 8.984        
cufflinks 4.994       Low
cufflinks 6.114        
cufflinks 9.613        
cufflinks 7.687        
cufflinks 11.534        
cufflinks 8.825        
cufflinks 4.002       Low
cufflinks 89.9443 0.0 184.508 High High
cufflinks 73.072 14.2938 131.85 High High
cufflinks 2.71084 0.0 5.81062   Low
cufflinks 32.3904 0.0 65.2164 High Low
cufflinks 46.2028 3.67082 88.7348 High High

0 Strain