Gene : Cre10.g444000 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR14143 - INTERFERON-INDUCIBLE GTPASE 5 Genomic Order:  565
Name:  ? Cre10.g444000 Secondary Identifier:  ? PAC:30790273
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g444000 0.5kb upstream 0.5kb upstream 3752 true chromosome_10: 3362099-3365850 Chlamydomonas reinhardtii
Cre10.g444000 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 3362099-3362598 Chlamydomonas reinhardtii
Cre10.g444000 0.5kb downstream 0.5kb downstream 3752 true chromosome_10: 3362599-3366350 Chlamydomonas reinhardtii
Cre10.g444000 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 3365851-3366350 Chlamydomonas reinhardtii
Cre10.g444000 1.0kb upstream 1.0kb upstream 4252 true chromosome_10: 3361599-3365850 Chlamydomonas reinhardtii
Cre10.g444000 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 3361599-3362598 Chlamydomonas reinhardtii
Cre10.g444000 1.0kb downstream 1.0kb downstream 4252 true chromosome_10: 3362599-3366850 Chlamydomonas reinhardtii
Cre10.g444000 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 3365851-3366850 Chlamydomonas reinhardtii
Cre10.g444000 2.0kb upstream 2.0kb upstream 5252 true chromosome_10: 3360599-3365850 Chlamydomonas reinhardtii
Cre10.g444000 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 3360599-3362598 Chlamydomonas reinhardtii
Cre10.g444000 2.0kb downstream 2.0kb downstream 5252 true chromosome_10: 3362599-3367850 Chlamydomonas reinhardtii
Cre10.g444000 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 3365851-3367850 Chlamydomonas reinhardtii
Cre10.g444000 5.0kb upstream 5.0kb upstream 8252 true chromosome_10: 3357599-3365850 Chlamydomonas reinhardtii
Cre10.g444000 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 3357599-3362598 Chlamydomonas reinhardtii
Cre10.g444000 5.0kb downstream 5.0kb downstream 8252 true chromosome_10: 3362599-3370850 Chlamydomonas reinhardtii
Cre10.g444000 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 3365851-3370850 Chlamydomonas reinhardtii
Cre10.g444000 10.0kb upstream 10.0kb upstream 13252 true chromosome_10: 3352599-3365850 Chlamydomonas reinhardtii
Cre10.g444000 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 3352599-3362598 Chlamydomonas reinhardtii
Cre10.g444000 10.0kb downstream 10.0kb downstream 13252 true chromosome_10: 3362599-3375850 Chlamydomonas reinhardtii
Cre10.g444000 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 3365851-3375850 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081471 5260 Chlorophyte View MSA
123399197 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.456     High  
cufflinks 28.435     High  
cufflinks 33.855     High  
cufflinks 40.504     High  
cufflinks 25.812     High  
cufflinks 23.003     High  
cufflinks 30.049     High  
cufflinks 44.42     High High
cufflinks 18.378     High Low
cufflinks 12.05     High Low
cufflinks 33.301     High  
cufflinks 48.247     High High
cufflinks 44.912     High High
cufflinks 29.149     High  
cufflinks 40.8     High  
cufflinks 24.095     High  
cufflinks 32.508     High  
cufflinks 29.23     High  
cufflinks 16.227     High Low
cufflinks 31.845     High  
cufflinks 33.063     High  
cufflinks 34.255     High  
cufflinks 36.387     High  
cufflinks 50.55     High High
cufflinks 32.129     High  
cufflinks 36.6 0.0 73.2455 High Low
cufflinks 7.33831 1.9326 12.744   Low
cufflinks 12.2063 0.0 24.5347    
cufflinks 10.5059 1.25781 19.754   Low
cufflinks 31.2595 4.10873 58.4102 High  

0 Strain